Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3206g00005 ATGAGAAAGAACAAGAATCCCCTGGTTTTTATGGATGTGTCGATCGATGGGGATCCTGTTGAAAGGATGGTTTTTGAGCTCTTCTATGATTATGCTCCCAAGACTGCTGAAAACTTTCGTGCATTATGTACAGGAGAAAGAGGTGTCAGTCCAAATACTGGAAAATCACTACACTACAAGGGTTCTTTCTTCCATCGAATTATAAAAGGCTCATATGTGCAGGGTGGTGATTTTATCAATCGAAATGGTACTGGTGGAGAAAGCATATATGGTTCGAAGTTCCCAGATGAGTCACCTAGGCTAAGGCATGATTCGATAGGGCTTCTATCGATGGCAATTGCTGACCGTGACACTCTTGGTTCTCATTTTATTATCACTTTGAAAGCTGATCATCATCTTGATAGGAAGCATGTAGTCTTTGGGGATCTTGTGCAAGGACATGCTGTATTGAAGAAAATTGAAGATGTTGGTGATGAAGAAGGACATCCAACAGTAACTGTTAAAATTATTAATTGTGGTGAATATAGTGAAGATGGGAAGAAGGTAAATAAATCAAAAATAGGAAGGGATGGATCTTCTGAAGCCAATAGTCATGAAGCACGGAGGAAGGGAAAGCACAAAAAATCTTCAAAAGACAGAAGGAAAAGGAGAAGATACTACTCATCTGAATCAGACAGTTCTTCAGATTCAGAGATGGAATCTTCGGAAACTGATAGTGATTCTGAGTCAGATATGTCCTCATCATCTTATATAAGTTCCTCCAGTGATGATAGGCGAAGAAAGAGAAAGAGATCTAGGAAAGATAAACGTAGACGTGGAAAAAGAAGAGATAAACGCCGTGAAAAGAGACGAAGGAGACGGGATAAGAGATCAAAGCGTAAATCAAGACGGGATTTGGGTAGTGATTCAGACAGTGAGAGTAACAGTGACAGTAGCTCTGATGGTGAAAGTCTTGATGCTCAAGGGAAAGGGCTGAAGCGTAAAGATCATTCTGAGAAAAAAGCTGATATAAATTCTCCCTTAGCTGTGGAGAAAGATGTACCTCCCTTACATCATAAAAATGAGCAGGAATTGGGTTTGCTAGAGAATGAGGAAAAGTTCCCAAAGGAAAATGGAGAGCGGCATAGCAATGGCGTTGGAGCTGACTATAGATCTGACAGAAGTGAAGAGAGGCAGCCTGATGTGATGGATGATCATTCGGGAAAATCTAGGAGTCGAAGCATAAGTCCTAAGCGAGCCATGAGTAAGAGTATGAGTATTAGCCCTGGTAGGAGTGAGACCAAGAGCCCAAGTATTACTCCAAAAAAGAGATTGAGCAGAGGTCCAAGTGTTAGAAGCCCTTCTCCTCTGTCAAGGAGGAGTTTGAGCAAAAGTCCCGTTAGAAGCATCAGCAGGAGTCCAAGCAGAACCATCAGTAGAAGCCCAATGGGGGGCAGGAGGGGGAGAAGTGTTAGTGGAAGCCCTGTGAGAGCTCGTCCTCTTAGAAATGTCAGTGACAGCCCCGTAGGATCCCTTTCTCGAAGCAGGCGAAGCAGGAGTTCTCCCAGAGCATCATCACGAAAGACAATCAGCAGAAGCCCTGTAAGAGTGTTGAGAAAGAGTGTAAGCCGCAGTCCAGTTAGATCACCTGCAAGAAGCTTAAGCAGAAGCTCTGGCAGGGTCCTTTCAAAGCGGAGCATTAGCCGAAGTCCTGTCCGTGCACCAAGTAGAAGCAATCGCCGCAGTTATTCTAGGAGTGCTAGCCCTGTTCGTAGGGTAAGGACACCTCGTGGGAGAAGTGTGTCGAAGAGTGTTTCACCTGATGCTTCGCCGAAACGTATCAGAAGGGGAAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGGTATAGAACCCCCTCTCGGTCTCCTGTGAGGTCATACCGCTACAATGGAAGAAATGACCGTGACAGATATTCTACTTACAGAAGGTATTCCCCTAGGCGTTACAGAAGCCCACAACCACGTGGAAGAACTCCCCCAAGGTACCGGAGCAGGAGGAGCAGGACGCCATCTGTTTCACGCAGCCCACGATATCGAGCTCGACGATATAGCCCTAGCCGTAGCCCAGTTCGCAGTCGTTCCCCTGTTGAGCCTTATCGATCTCGCCCCTCTCCTCGTGTGGATAGGCGGGTGTCATCTTCTCGGAGCAGGAGTCCTTCAAAATCCAGGTCGTCCATGGAATCAGTGTCTCCACGGAAAGCAAGCAGAGACAACCGGTCAGGGTCATCGTCCAGAAGCCCAGATGGAAATAAAGGCCTGGTCTCATATGGAGATGTTTCTCCCTACTCGGGCCAAAGGTGA 2322 0.4604 MRKNKNPLVFMDVSIDGDPVERMVFELFYDYAPKTAENFRALCTGERGVSPNTGKSLHYKGSFFHRIIKGSYVQGGDFINRNGTGGESIYGSKFPDESPRLRHDSIGLLSMAIADRDTLGSHFIITLKADHHLDRKHVVFGDLVQGHAVLKKIEDVGDEEGHPTVTVKIINCGEYSEDGKKVNKSKIGRDGSSEANSHEARRKGKHKKSSKDRRKRRRYYSSESDSSSDSEMESSETDSDSESDMSSSSYISSSSDDRRRKRKRSRKDKRRRGKRRDKRREKRRRRRDKRSKRKSRRDLGSDSDSESNSDSSSDGESLDAQGKGLKRKDHSEKKADINSPLAVEKDVPPLHHKNEQELGLLENEEKFPKENGERHSNGVGADYRSDRSEERQPDVMDDHSGKSRSRSISPKRAMSKSMSISPGRSETKSPSITPKKRLSRGPSVRSPSPLSRRSLSKSPVRSISRSPSRTISRSPMGGRRGRSVSGSPVRARPLRNVSDSPVGSLSRSRRSRSSPRASSRKTISRSPVRVLRKSVSRSPVRSPARSLSRSSGRVLSKRSISRSPVRAPSRSNRRSYSRSASPVRRVRTPRGRSVSKSVSPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRNDRDRYSTYRRYSPRRYRSPQPRGRTPPRYRSRRSRTPSVSRSPRYRARRYSPSRSPVRSRSPVEPYRSRPSPRVDRRVSSSRSRSPSKSRSSMESVSPRKASRDNRSGSSSRSPDGNKGLVSYGDVSPYSGQR 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3206g00005 773 MobiDBLite consensus disorder prediction 724 757 - -
Gabi3206g00005 773 MobiDBLite consensus disorder prediction 444 473 - -
Gabi3206g00005 773 MobiDBLite consensus disorder prediction 539 582 - -
Gabi3206g00005 773 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Gabi3206g00005 773 MobiDBLite consensus disorder prediction 602 622 - -
Gabi3206g00005 773 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Gabi3206g00005 773 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Gabi3206g00005 773 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Gabi3206g00005 773 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Gabi3206g00005 773 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Gabi3206g00005 773 MobiDBLite consensus disorder prediction 201 215 - -
Gabi3206g00005 773 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Gabi3206g00005 773 MobiDBLite consensus disorder prediction 259 294 - -
Gabi3206g00005 773 MobiDBLite consensus disorder prediction 320 405 - -
Gabi3206g00005 773 Gene3D - 1 175 IPR029000 -
Gabi3206g00005 773 SUPERFAMILY Cyclophilin-like 5 176 IPR029000 -
Gabi3206g00005 773 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Gabi3206g00005 773 MobiDBLite consensus disorder prediction 179 773 - -
Gabi3206g00005 773 MobiDBLite consensus disorder prediction 407 436 - -
Gabi3206g00005 773 MobiDBLite consensus disorder prediction 635 650 - -
Gabi3206g00005 773 MobiDBLite consensus disorder prediction 179 200 - -
Gabi3206g00005 773 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Gabi3206g00005 773 MobiDBLite consensus disorder prediction 499 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3206g00005 Gabi-Chr3206 29354 35236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3206g00005 25 170 U-box Gene Family AT5G67530 42.568 4.79e-22 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3206g00005 K09566 - gmx:100800303 359.762