Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3206g00004 ATGAGAAAGAACAAGAATCCCCTGGTTTTTATGGATGTGTCGATCGATGGGGATCCTGTTGAAAGGATGGTTTTTGAGCTCTTCTATGATTATGCTCCCAAGACTGCTGAAAACTTTCGTGCATTATGTACAGGAGAAAGAGGTGTCAGTCCAAATACTGGAAAATCACTACACTACAAGGGTTCTTTCTTCCATCGAATTATAAAAGGCTCATATGTGCAGGGTGGTGATTTTATCAATCGAAATGGTACTGGTGGAGAAAGCATATATGGTTCGAAGTTCCCAGATGAGTCACCTAGGCTAAGGCATGATTCGATAGGGCTTCTATCGATGGCAATTGCTGACCGTGACACTCTTGGTTCTCATTTTATTATCACTTTGAAAGCTGATCATCATCTTGATAGGAAGCATGTAGTCTTTGGGGATCTTGTGCAAGGACATGCTGTATTGAAGAAAATTGAAGATGTTGGTGATGAAGAAGGACATCCAACAGTAACTGTTAAAATTATTAATTGTGGTGAATATAGTGAAGATGGGAAGAAGGTAAATAAATCAAAAATAGGAAGGGATGGATCTTCTGAAGCCAATAGTCATGAAGCACGGAGGAAGGGAAAGCACAAAAAATCTTCAAAAGACAGAAGGAAAAGGAGAAGATACTACTCATCTGAATCAGACAGTTCTTCAGATTCAGAGATGGAATCTTCGGAAACTGATAGTGATTCTGAGTCAGATATGTCCTCATCATCTTATATAAGTTCCTCCAGTGATGATAGGCGAAGAAAGAGAAAGAGATCTAGGAAAGATAAACGTAGACGTGGAAAAAGAAGAGATAAACGCCGTGAAAAGAGACGAAGGAGACGGGATAAGAGATCAAAGCGTAAATCAAGACGGGATTTGGGTAGTGATTCAGACAGTGAGAGTAACAGTGACAGTAGCTCTGATGGTGAAAGTCTTGATGCTCAAGGGAAAGGGCTGAAGCGTAAAGATCATTCTGAGAAAAAAGCAGCTGATATAAATTCTCCCTTAGCTGTGGAGAAAGATGTACCTCCCTTACATCATAAAAATGAGCAGGAATTGGGTTTGCTAGAGAATGAGGAAAAGTTCCCAAAGGAAAATGGAGAGCGGCATAGCAATGGCGTTGGAGCTGACTATAGATCTGACAGAAGTGAAGAGAGGCAGCCTGATGTGATGGATGATCATTCGGGAAAATCTAGGAGTCGAAGCATAAGTCCTAAGCGAGCCATGAGTAAGAGTATGAGTATTAGCCCTGGTAGGAGTGAGACCAAGAGCCCAAGTATTACTCCAAAAAAGAGATTGAGCAGAGGTCCAAGTGTTAGAAGCCCTTCTCCTCTGTCAAGGAGGAGTTTGAGCAAAAGTCCCGTTAGAAGCATCAGCAGGAGTCCAAGCAGAACCATCAGTAGAAGCCCAATGGGGGGCAGGAGGGGGAGAAGTGTTAGTGGAAGCCCTGTGAGAGCTCGTCCTCTTAGAAATGTCAGTGACAGCCCCGTAGGATCCCTTTCTCGAAGCAGGCGAAGCAGGAGTTCTCCCAGAGCATCATCACGAAAGACAATCAGCAGAAGCCCTGTAAGAGTGTTGAGAAAGAGTGTAAGCCGCAGTCCAGTTAGATCACCTGCAAGAAGCTTAAGCAGAAGCTCTGGCAGGGTCCTTTCAAAGCGGAGCATTAGCCGAAGTCCTGTCCGTGCACCAAGTAGAAGCAATCGCCGCAGTTATTCTAGGAGTGCTAGCCCTGTTCGTAGGGTAAGGACACCTCGTGGGAGAAGTGTGTCGAAGAGTGTTTCACCTGATGCTTCGCCGAAACGTATCAGAAGGGGAAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGGTATAGAACCCCCTCTCGGTCTCCTGTGAGGTCATACCGCTACAATGGAAGAAATGACCGTGACAGATATTCTACTTACAGAAGGTATTCCCCTAGGCGTTACAGAAGCCCACAACCACGTGGAAGAACTCCCCCAAGGTACCGGAGCAGGAGGAGCAGGACGCCATCTGTTTCACGCAGCCCACGATATCGAGCTCGACGATATAGCCCTAGCCGTAGCCCAGTTCGCAGTCGTTCCCCTGTTGAGCCTTATCGATCTCGCCCCTCTCCTCGTGTGGATAGGCGGGTGTCATCTTCTCGGAGCAGGAGTCCTTCAAAATCCAGGTCGTCCATGGAATCAGTGTCTCCACGGAAAGCAAGCAGAGACAACCGGTCAGGGTCATCGTCCAGAAGCCCAGATGGAAATAAAGGCCTGGTCTCATATGGAGATGTTTCTCCCTACTCGGGCCAAAGGTGA 2325 0.4606 MRKNKNPLVFMDVSIDGDPVERMVFELFYDYAPKTAENFRALCTGERGVSPNTGKSLHYKGSFFHRIIKGSYVQGGDFINRNGTGGESIYGSKFPDESPRLRHDSIGLLSMAIADRDTLGSHFIITLKADHHLDRKHVVFGDLVQGHAVLKKIEDVGDEEGHPTVTVKIINCGEYSEDGKKVNKSKIGRDGSSEANSHEARRKGKHKKSSKDRRKRRRYYSSESDSSSDSEMESSETDSDSESDMSSSSYISSSSDDRRRKRKRSRKDKRRRGKRRDKRREKRRRRRDKRSKRKSRRDLGSDSDSESNSDSSSDGESLDAQGKGLKRKDHSEKKAADINSPLAVEKDVPPLHHKNEQELGLLENEEKFPKENGERHSNGVGADYRSDRSEERQPDVMDDHSGKSRSRSISPKRAMSKSMSISPGRSETKSPSITPKKRLSRGPSVRSPSPLSRRSLSKSPVRSISRSPSRTISRSPMGGRRGRSVSGSPVRARPLRNVSDSPVGSLSRSRRSRSSPRASSRKTISRSPVRVLRKSVSRSPVRSPARSLSRSSGRVLSKRSISRSPVRAPSRSNRRSYSRSASPVRRVRTPRGRSVSKSVSPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRNDRDRYSTYRRYSPRRYRSPQPRGRTPPRYRSRRSRTPSVSRSPRYRARRYSPSRSPVRSRSPVEPYRSRPSPRVDRRVSSSRSRSPSKSRSSMESVSPRKASRDNRSGSSSRSPDGNKGLVSYGDVSPYSGQR 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3206g00004 774 MobiDBLite consensus disorder prediction 408 437 - -
Gabi3206g00004 774 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Gabi3206g00004 774 MobiDBLite consensus disorder prediction 725 758 - -
Gabi3206g00004 774 MobiDBLite consensus disorder prediction 445 474 - -
Gabi3206g00004 774 MobiDBLite consensus disorder prediction 201 215 - -
Gabi3206g00004 774 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Gabi3206g00004 774 MobiDBLite consensus disorder prediction 259 294 - -
Gabi3206g00004 774 Gene3D - 1 175 IPR029000 -
Gabi3206g00004 774 MobiDBLite consensus disorder prediction 636 651 - -
Gabi3206g00004 774 SUPERFAMILY Cyclophilin-like 5 176 IPR029000 -
Gabi3206g00004 774 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Gabi3206g00004 774 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Gabi3206g00004 774 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Gabi3206g00004 774 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Gabi3206g00004 774 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Gabi3206g00004 774 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Gabi3206g00004 774 MobiDBLite consensus disorder prediction 500 532 - -
Gabi3206g00004 774 MobiDBLite consensus disorder prediction 347 406 - -
Gabi3206g00004 774 MobiDBLite consensus disorder prediction 320 340 - -
Gabi3206g00004 774 MobiDBLite consensus disorder prediction 540 583 - -
Gabi3206g00004 774 MobiDBLite consensus disorder prediction 179 774 - -
Gabi3206g00004 774 MobiDBLite consensus disorder prediction 179 200 - -
Gabi3206g00004 774 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Gabi3206g00004 774 MobiDBLite consensus disorder prediction 603 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3206g00004 Gabi-Chr3206 29354 35239 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3206g00004 25 170 U-box Gene Family AT5G67530 42.568 4.59e-22 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3206g00004 K09566 - gmx:100800303 359.762