Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3206g00003 ATGTACAGGAGAAAGAGGTGTCAGTCCAAATACTGGAAAATCACTACACTACAAGGGTTCTTTCTTCCATCGAATTATAAAAGGCTCATATGTGCAGGATACAGGGCTGATGGTCACGACTGCTTTTCTTGTGATATAGTTTTAAGGGTGGTGATTTTATCAATCGAAATGTTGTCCGAGTTGCAAGCCTTGTTCCATTTGCATGTTTCCTGTGACAATGGTACTGGTGGAGAAAGCATATATGGTTCGAAGTTCCCAGATGAGTCACCTAGGCTAAGGCATGATTCGATAGGGCTTCTATCGATGGCAATTGCTGACCGTGACACTCTTGGTTCTCATTTTATTATCACTTTGAAAGCTGATCATCATCTTGATAGGAAGCATGTAGTCTTTGGGGATCTTGTGCAAGGACATGCTGTATTGAAGAAAATTGAAGATGTTGGTGATGAAGAAGGACATCCAACAGTAACTGTTAAAATTATTAATTGTGGTGAATATAGTGAAGATGGGAAGAAGGTAAATAAATCAAAAATAGGAAGGGATGGATCTTCTGAAGCCAATAGTCATGAAGCACGGAGGAAGGGAAAGCACAAAAAATCTTCAAAAGACAGAAGGAAAAGGAGAAGATACTACTCATCTGAATCAGACAGTTCTTCAGATTCAGAGATGGAATCTTCGGAAACTGATAGTGATTCTGAGTCAGATATGTCCTCATCATCTTATATAAGTTCCTCCAGTGATGATAGGCGAAGAAAGAGAAAGAGATCTAGGAAAGATAAACGTAGACGTGGAAAAAGAAGAGATAAACGCCGTGAAAAGAGACGAAGGAGACGGGATAAGAGATCAAAGCGTAAATCAAGACGGGATTTGGGTAGTGATTCAGACAGTGAGAGTAACAGTGACAGTAGCTCTGATGGTGAAAGTCTTGATGCTCAAGGGAAAGGGCTGAAGCGTAAAGATCATTCTGAGAAAAAAGCAGCTGATATAAATTCTCCCTTAGCTGTGGAGAAAGATGTACCTCCCTTACATCATAAAAATGAGCAGGAATTGGGTTTGCTAGAGAATGAGGAAAAGTTCCCAAAGGAAAATGGAGAGCGGCATAGCAATGGCGTTGGAGCTGACTATAGATCTGACAGAAGTGAAGAGAGGCAGCCTGATGTGATGGATGATCATTCGGGAAAATCTAGGAGTCGAAGCATAAGTCCTAAGCGAGCCATGAGTAAGAGTATGAGTATTAGCCCTGGTAGGAGTGAGACCAAGAGCCCAAGTATTACTCCAAAAAAGAGATTGAGCAGAGGTCCAAGTGTTAGAAGCCCTTCTCCTCTGTCAAGGAGGAGTTTGAGCAAAAGTCCCGTTAGAAGCATCAGCAGGAGTCCAAGCAGAACCATCAGTAGAAGCCCAATGGGGGGCAGGAGGGGGAGAAGTGTTAGTGGAAGCCCTGTGAGAGCTCGTCCTCTTAGAAATGTCAGTGACAGCCCCGTAGGATCCCTTTCTCGAAGCAGGCGAAGCAGGAGTTCTCCCAGAGCATCATCACGAAAGACAATCAGCAGAAGCCCTGTAAGAGTGTTGAGAAAGAGTGTAAGCCGCAGTCCAGTTAGATCACCTGCAAGAAGCTTAAGCAGAAGCTCTGGCAGGGTCCTTTCAAAGCGGAGCATTAGCCGAAGTCCTGTCCGTGCACCAAGTAGAAGCAATCGCCGCAGTTATTCTAGGAGTGCTAGCCCTGTTCGTAGGGTAAGGACACCTCGTGGGAGAAGTGTGTCGAAGAGTGTTTCACCTGATGCTTCGCCGAAACGTATCAGAAGGGGAAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGGTATAGAACCCCCTCTCGGTCTCCTGTGAGGTCATACCGCTACAATGGAAGAAATGACCGTGACAGATATTCTACTTACAGAAGGTATTCCCCTAGGCGTTACAGAAGCCCACAACCACGTGGAAGAACTCCCCCAAGGTACCGGAGCAGGAGGAGCAGGACGCCATCTGTTTCACGCAGCCCACGATATCGAGCTCGACGATATAGCCCTAGCCGTAGCCCAGTTCGCAGTCGTTCCCCTGTTGAGCCTTATCGATCTCGCCCCTCTCCTCGTGTGGATAGGCGGGTGTCATCTTCTCGGAGCAGGAGTCCTTCAAAATCCAGGTCGTCCATGGAATCAGTGTCTCCACGGAAAGCAAGCAGAGACAACCGGTCAGGGTCATCGTCCAGAAGCCCAGATGGAAATAAAGGCCTGGTCTCATATGGAGATGTTTCTCCCTACTCGGGCCAAAGGTGA 2298 0.4617 MYRRKRCQSKYWKITTLQGFFLPSNYKRLICAGYRADGHDCFSCDIVLRVVILSIEMLSELQALFHLHVSCDNGTGGESIYGSKFPDESPRLRHDSIGLLSMAIADRDTLGSHFIITLKADHHLDRKHVVFGDLVQGHAVLKKIEDVGDEEGHPTVTVKIINCGEYSEDGKKVNKSKIGRDGSSEANSHEARRKGKHKKSSKDRRKRRRYYSSESDSSSDSEMESSETDSDSESDMSSSSYISSSSDDRRRKRKRSRKDKRRRGKRRDKRREKRRRRRDKRSKRKSRRDLGSDSDSESNSDSSSDGESLDAQGKGLKRKDHSEKKAADINSPLAVEKDVPPLHHKNEQELGLLENEEKFPKENGERHSNGVGADYRSDRSEERQPDVMDDHSGKSRSRSISPKRAMSKSMSISPGRSETKSPSITPKKRLSRGPSVRSPSPLSRRSLSKSPVRSISRSPSRTISRSPMGGRRGRSVSGSPVRARPLRNVSDSPVGSLSRSRRSRSSPRASSRKTISRSPVRVLRKSVSRSPVRSPARSLSRSSGRVLSKRSISRSPVRAPSRSNRRSYSRSASPVRRVRTPRGRSVSKSVSPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRNDRDRYSTYRRYSPRRYRSPQPRGRTPPRYRSRRSRTPSVSRSPRYRARRYSPSRSPVRSRSPVEPYRSRPSPRVDRRVSSSRSRSPSKSRSSMESVSPRKASRDNRSGSSSRSPDGNKGLVSYGDVSPYSGQR 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3206g00003 765 MobiDBLite consensus disorder prediction 436 465 - -
Gabi3206g00003 765 MobiDBLite consensus disorder prediction 716 749 - -
Gabi3206g00003 765 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 30 165 IPR002130 GO:0000413|GO:0003755
Gabi3206g00003 765 MobiDBLite consensus disorder prediction 531 574 - -
Gabi3206g00003 765 MobiDBLite consensus disorder prediction 170 765 - -
Gabi3206g00003 765 MobiDBLite consensus disorder prediction 170 191 - -
Gabi3206g00003 765 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 76 164 IPR002130 GO:0000413|GO:0003755
Gabi3206g00003 765 MobiDBLite consensus disorder prediction 594 614 - -
Gabi3206g00003 765 SUPERFAMILY Cyclophilin-like 70 167 IPR029000 -
Gabi3206g00003 765 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 72 165 - -
Gabi3206g00003 765 MobiDBLite consensus disorder prediction 338 397 - -
Gabi3206g00003 765 MobiDBLite consensus disorder prediction 192 206 - -
Gabi3206g00003 765 MobiDBLite consensus disorder prediction 311 331 - -
Gabi3206g00003 765 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Gabi3206g00003 765 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Gabi3206g00003 765 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Gabi3206g00003 765 Gene3D - 63 167 IPR029000 -
Gabi3206g00003 765 MobiDBLite consensus disorder prediction 250 285 - -
Gabi3206g00003 765 MobiDBLite consensus disorder prediction 399 428 - -
Gabi3206g00003 765 MobiDBLite consensus disorder prediction 627 642 - -
Gabi3206g00003 765 MobiDBLite consensus disorder prediction 491 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3206g00003 Gabi-Chr3206 29354 35729 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3206g00003 74 161 U-box Gene Family AT5G67530 44.444 2.02e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3206g00003 K09566 - qsu:112027169 310.842