Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3205g00001 ATGGCTCAAGTGGTTATTGGGACCCCTGGCACGATTAATAAGTGGATGACTTTTAAGAAACTTGGGGTGACAAGTTTGAAGATTCTTGTTTTTGATGAGGCTGATCAAATGCTTGCTGAGGATGGATTTAAAGATGATTCCCTGAGGATAATGAAAAGAATAGAAAAATTCAATTCTAACTGTCAGGTTCTTTTGTTTTCTGCTACATTCAATGACATTGTCAAGAATTTTGTTTCGAGGACAGTTAAGCAGGATTATAATACACTTTTTGTGAAGGAACTATCTTTAGATGTCGTAAAGCAATATAAAGTTCATTATCCTGATGAACTCTCTAAGATTGAAATGAAAAAAGATTACATACTCGAAATAGGAGAGAATCTGGGGCAAACTATAATATTTGTGCGCACAAGAAATAGTGCAAAAATGTTACATAAATCACTTGTTGTCGCTCCTGTTGTCGCTCCCGTCGCCCCAAGTAAGGGAGTCGACAAGGGAAAAAGGAAAATGGTGAACATTGTTAAAAGGAAGGTCCGGTCTGCAGCGGACATTCCTGCCGAGGAGCTTGCTAGGAGGACTGGCGGCCCGGTTATTAAGGATGTGCAGGAGAATGCCCAGAGTTTGGCGGTCAACCCTTCTGCACCTGAAGTTATTCCTCCTAAACCAACGGCTTCTGGAAAGAAGAGGGTTGCTAGCGAGGATTTAAGCTCGCCTAAAGGAGCTAAAACGGTTAGGGTGGAGCCGACTGAGTCTGTTCAATCAGGTGGTAGTCTCTCGTTTGCCATGGAGAGTTTCTCGGACGCCCCTGGCGGTGATGACATGATGGTGGTCAATACTCCGGACAGGGCGGGGGTACCTGTCATGGCGACTGTCGAAGGAACTTCAACGTCTGCGGCTGTTTCGTTAGTGCAGATCCTGAAGCTATCCGAGAGGGATCTGAACTCTAGTTTCCCTAATCCTGATTTAAACGTGTTGGTACCACAGCAAATTAATCGCCAAGACATCATTGACTGTGTACAGGTAATGATCGGTCAGATTATGGGAGCCCGGGAGGCTACTCTTGCTGTTGACAGCCGTTGTTCTACCCAGCATGATGACTTGGTACAGAAAGAGCGCAAGATTGAGTCCTTAACGGCCGAGATCGGGCGGTTGAGCTTAAGAAAACATAGAGGTTAG 1173 0.4493 MAQVVIGTPGTINKWMTFKKLGVTSLKILVFDEADQMLAEDGFKDDSLRIMKRIEKFNSNCQVLLFSATFNDIVKNFVSRTVKQDYNTLFVKELSLDVVKQYKVHYPDELSKIEMKKDYILEIGENLGQTIIFVRTRNSAKMLHKSLVVAPVVAPVAPSKGVDKGKRKMVNIVKRKVRSAADIPAEELARRTGGPVIKDVQENAQSLAVNPSAPEVIPPKPTASGKKRVASEDLSSPKGAKTVRVEPTESVQSGGSLSFAMESFSDAPGGDDMMVVNTPDRAGVPVMATVEGTSTSAAVSLVQILKLSERDLNSSFPNPDLNVLVPQQINRQDIIDCVQVMIGQIMGAREATLAVDSRCSTQHDDLVQKERKIESLTAEIGRLSLRKHRG 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3205g00001 390 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 88 IPR014001 -
Gabi3205g00001 390 MobiDBLite consensus disorder prediction 207 252 - -
Gabi3205g00001 390 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 2 147 - -
Gabi3205g00001 390 Pfam DEAD/DEAH box helicase 2 76 IPR011545 GO:0003676|GO:0005524
Gabi3205g00001 390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 149 IPR027417 -
Gabi3205g00001 390 Coils Coil 366 386 - -
Gabi3205g00001 390 Gene3D - 1 97 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3205g00001 Gabi-Chr3205 197 2575 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3205g00001 3 226 Eukaryotic Initiation Factors Gene Family AT1G72730 30.544 3.30e-12 65.9