Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3203g00069 ATGGTCTTGTGCAATCTATCCGTCCTCGTCAAAATTTCCATGGCTATTTCCGAGCTATCCATAACCTTATTCATGGTCTATTTTCTCATCAACTTTGCGTCTCTTGCATCCTCCTCTTCCTCTGCTGATACCATTTGCAACCTCACACCTTATCCAACATTTTGCGAATCCAATTCACCTTCAAAAGACCAAGCCGAGATACATGAATATGGCCGGTTTTTCGCAAGCAAATCCTTGTCATCATCAAAGAAGTTTCTTTCATTAGTCTCTAAATACCTAAAATCTCCCTCCAAGTTCTCTATGTCAACGATGCTTGCCCTTCAAGATTGCCACCTTATAGGTGACCTGAATATAGATTTTTGGTCTAAGACTCTACACAGTATCAATTCCACCAACACCCTCAGTAGCTCAGAAGCTGAAAATTTGCATTCCTTGATTAGTGCTACTTTGACAAACCACGACACCTGCTTAGACAGCCTTCAACAAACCGCGTCAAGCCCTGACGATGACCTACTAAGCCATCTTTCGAATGGAACCAAGTTTTATAGTATATCTCTTGCCATCTTTAAGCGGGGATGGACAAACAAAGTAAACAAAGAAAGAAAACTAGCAGAAAGCAATAATAATCTCATGTACGAGCGTATCATCAGAAGAGGAAGAAAGCTGCTTCAGTTGGATCCTGACAATGTTGTTGTGAACCAACTTGTTGTAGTGAACCCAGATGGCTCTGGAAACTACACAACTATCAATGATGCGGTGTCTGCAGCCCCAAACAACACCGGCGGTATCAATGGGTTTTTCATGATTTACGTGGTGGCTGGAATATACGAAGAGTATGTTTCTGTTCCCAAATACAAGCAGTACTTGATGATGGTAGGAGATGGAATTAACCAGACCATAATCACGGGTAATCGGAGCGTGGCAGCTGGCTGGACTACCTTCAATTCTGCTACATTTGCCGTGGTTGCACAAGGTTTTGTGGCAGTCAACATAACATTTCGTAACACAGCTGGAGCAATTAATCACCAAGCAGTAGCACTCCGAAGCGGGGCAGACCTGTCTGCATTTTATAACTGTAGCTTTGAAGGATACCAAGACACCTTATACACACATTCTCTTAGGCAATTTTATAGAAACTGTGACATTTATGGCACGGTGGATTTCATATTTGGTAACGCTGCAGTTGTTTTGCAAGACTGTAATATCTACCCAAGACTCCCATTGGACGGTCAATTCAATGCCATTACCGCACAGGGCCGAACTGATATTAACCAAAACACTGGCACTTCTATACACAATTGTAACATAACCGCAGCTAGTGACTTAGCCACTAGTAATGGCACCACAAAAACGTACCTAGGCAGGCCATGGAAGCAATATTCAACAACAGTTTACATGCAGTCTTTCATGGATAGCTTCATCGATCCTTCGGGTTGGACAGAATGGTCAGGGGATTTTGCCTTGGACACCCTTTATTATGCTGAATTTGATAATCAGGGCCCAGGATCTAACACTAGCAATAGGGTTACTTGGCTTGGGTACCATGTCATCAATGCCACAGATGCAGTCAATTTCACAGTTTCTCTTTACATACAAGGTGATGCTTGGCTGCCTGCAACCGGAGTACCTTACTATGCTGATTTGCTTTGA 1650 0.4285 MVLCNLSVLVKISMAISELSITLFMVYFLINFASLASSSSSADTICNLTPYPTFCESNSPSKDQAEIHEYGRFFASKSLSSSKKFLSLVSKYLKSPSKFSMSTMLALQDCHLIGDLNIDFWSKTLHSINSTNTLSSSEAENLHSLISATLTNHDTCLDSLQQTASSPDDDLLSHLSNGTKFYSISLAIFKRGWTNKVNKERKLAESNNNLMYERIIRRGRKLLQLDPDNVVVNQLVVVNPDGSGNYTTINDAVSAAPNNTGGINGFFMIYVVAGIYEEYVSVPKYKQYLMMVGDGINQTIITGNRSVAAGWTTFNSATFAVVAQGFVAVNITFRNTAGAINHQAVALRSGADLSAFYNCSFEGYQDTLYTHSLRQFYRNCDIYGTVDFIFGNAAVVLQDCNIYPRLPLDGQFNAITAQGRTDINQNTGTSIHNCNITAASDLATSNGTTKTYLGRPWKQYSTTVYMQSFMDSFIDPSGWTEWSGDFALDTLYYAEFDNQGPGSNTSNRVTWLGYHVINATDAVNFTVSLYIQGDAWLPATGVPYYADLL 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3203g00069 549 SMART PMEI_2 37 188 IPR006501 GO:0004857
Gabi3203g00069 549 PANTHER PECTINESTERASE 26 538 - -
Gabi3203g00069 549 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 191 IPR035513 -
Gabi3203g00069 549 FunFam Pectinesterase 229 548 - -
Gabi3203g00069 549 NCBIfam pectinesterase inhibitor domain 19 190 IPR006501 GO:0004857
Gabi3203g00069 549 Pfam Pectinesterase 236 534 IPR000070 GO:0030599|GO:0042545
Gabi3203g00069 549 ProSitePatterns Pectinesterase signature 2. 382 391 IPR033131 -
Gabi3203g00069 549 Pfam Plant invertase/pectin methylesterase inhibitor 43 188 IPR006501 GO:0004857
Gabi3203g00069 549 Gene3D - 230 548 IPR012334 -
Gabi3203g00069 549 SUPERFAMILY Pectin lyase-like 232 546 IPR011050 -
Gabi3203g00069 549 CDD PMEI-like_3 44 194 - -
Gabi3203g00069 549 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 191 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3203g00069 Gabi-Chr3203 490276 492965 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3203g00069 19 549 Carbohydrate Esterase AT4G02330 52.797 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3203g00069 K01051 - gmx:100801141 877.085