Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3203g00062 ATGGGGCATTTGTCCTCTATGTTCAATGGATTGGCAAGATCCTTTTCATTAAAGAAAGCAAAAAGTTCAGGGAGATGTAGCGGGAGAGAAGCTGCTGAAGCAATGTCAAAGGAAGCTAAGAAAAATAACTTGATACTATGTAGCTCTGGCACTGTTAATGTCGATGGTTCAAACAACTTTGCCTCCGTTTTCTCCAAAAAAGGCCAGAAAGGAGCGAACCAGGATTGCTGCGTAGTTTGGGAGGAATTTGGATGCCAAGAGGACATGATCTTCTGCGGCATTTTTGATGGGCATGGGCAATGGGGTCACTTTGTGGCCAAAAGAGTAAGAGAGTCAATGCCACCATCTTTGCTATGCAATTGGCAGGAAACCCTTGCCCAAACTTCACTTGATTCGGATATTGATATTGAGGCAGAGAAAAAGCAACATCGATTCAATATATGGAAGCATTCTTACTTGAAGACTTGTGCTGCCATTGATCAAGAACTACAGCAGTATCGCAAGATAGACTCATTTTACAGCGGAACAACTGCCCTTTCAATTGTTAGACAGGGTGAATTCATTGTCATAGCAAATGTTGGTGACTCTCGTGCTGTATTAGCTACAACATCAGATGATGGAAGTTTGGTACCAGTTCAGCTAACAGTTGATTTCAAGCCCAATTTACCTCAGGAGGCAGAGAGAATCATTCAGTGCCAGGGGCGAGTGTTCTGTTTACATGATGAACCTGGGGTGCATAGGGTGTGGTTGCCTGATGGAGAGTCTCCGGGACTTGCCATGTCTCGGGCTTTTGGTGACTACTGCATTAAAGAGTATGGTCTTATTTCAGTGCCTGAGGTAACACACAGGAATATATGCACTAGAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTTTGGGATGTAATCTCCAATCAAGAAGCAGTGGATATAGTATCTTCAACACCAGATAAAGCAAAGTCAGCTAAACGATTGGTGGAATGTGCAATGCATGCATGGAAACGCAAGAGGAGGGGCATTGCCATGGATGATATTTCAGCTATTTGTCTCTTCTTTCACTCTTCCACTTCCTCAGAACAAGTTAGCCAAGTTGTCACCTTAAAATAG 1107 0.4363 MGHLSSMFNGLARSFSLKKAKSSGRCSGREAAEAMSKEAKKNNLILCSSGTVNVDGSNNFASVFSKKGQKGANQDCCVVWEEFGCQEDMIFCGIFDGHGQWGHFVAKRVRESMPPSLLCNWQETLAQTSLDSDIDIEAEKKQHRFNIWKHSYLKTCAAIDQELQQYRKIDSFYSGTTALSIVRQGEFIVIANVGDSRAVLATTSDDGSLVPVQLTVDFKPNLPQEAERIIQCQGRVFCLHDEPGVHRVWLPDGESPGLAMSRAFGDYCIKEYGLISVPEVTHRNICTRDQFVVLATDGVWDVISNQEAVDIVSSTPDKAKSAKRLVECAMHAWKRKRRGIAMDDISAICLFFHSSTSSEQVSQVVTLK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3203g00062 368 SMART PP2C_4 51 350 IPR001932 -
Gabi3203g00062 368 PANTHER PROTEIN PHOSPHATASE 38 350 IPR015655 GO:0004722|GO:0006470
Gabi3203g00062 368 Pfam Protein phosphatase 2C 80 327 IPR001932 -
Gabi3203g00062 368 Gene3D - 46 355 IPR036457 -
Gabi3203g00062 368 SUPERFAMILY PP2C-like 56 353 IPR036457 -
Gabi3203g00062 368 CDD PP2Cc 59 352 IPR001932 -
Gabi3203g00062 368 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Gabi3203g00062 368 FunFam Probable protein phosphatase 2C 34 51 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3203g00062 Gabi-Chr3203 427721 431085 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3203g00062 1 353 PP2C-type Phosphatase Gene Family AT3G05640 73.239 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3203g00062 - - gmx:100808955 657.907