Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3203g00053 ATGAGTAAGATTGAATTATCAAGGATGAAGACACCGGCCGTTCCATTGGCTACTCTGATTGGGCGTGAGCTTCGAAATGAAAATGTTGAAAAACCTTTTGTGAAGTATGGGCAAGCTGGGTTGGCCAAGAAAGGAGAAGATTATTTTCTGATCAAGACAGACTGCCACAGGATTCCTGGGGATTCATCTACAGTGTTTTCTGTATTCGCGATCTTTGATGGGCATAACGGTATATCAGCTGCTATTTTTGCGAAGGAAAACTTGCTAAGTAATGTTTTGAGTGCATTACCGCAAGATATCAGCAGGGATGCATGGCTTCAGGAACTTCCTCGTGCTCTAGTTGTTGGTTTTGTGAAAACTGACATAGAGTTTCAGCAAAAGGGGGAAACTTCTGGAACAACTGCTACATTTGTCCTGATTGATGGATGGACTGTCACTGTTGCATCTGTTGGGGATTCCCGTTGCATATTAGATACTCAGGGAGGTGTAGTTTCTCTCTTGACAGTTGATCACAGACTAGAAGAGAATGCAGAAGAGAGGGAGCACGTTACTGCCAGTGGTGGTGAAGTAGGAAGACTCAATGTATATAGAGGCAACGAGGTAGGGCCTCTTCGCTGCTGGCCTGGTGGATTGTGCCTATCTAGATCAATAGGTGACACGGATGTGGGAGAATTTATTGTGCCAATACCACACGTTAAGCAAGTGAAGCTTTCAAATGCTGGTGGAAGGCTTATTATAGCCTCTGATGGTATTTGGGATGCTTTATCTTCTGATATGGCTGCCAAGTCATGTCGGGGTCTGCCTGCGGAGCTTGCTGCGAAGCTAGTGGTCAAGGAAGCTCTAAGGTCGAGAGGCCTGAAGGATGACACAACCTGCCTTGTTGTAGATATTATTCCTTCGGACCTCCCGGTATTACCACCAATTCCGAGAAAGAAACACAATATGCTTACTTCATTTCTCTTTGGAAAGAAATCTGAAAACTCCACAAACAAAGCTACTAATAAGCTTTCTGCAGTTGGTGTTGTGGAGGAGTTATTTGAAGAGGGTTCTGCCATGCTTGCAGAAAGGCTGGGTAAGGATTTTCCATTTAATAAGAATTCTGGGATTTTTCGCTGTGCGGTATGCCAAGTGGATCAACCCCCTGGCGATGGTTTATCAGTGAACTCTGGGCCTTTTTTCTCTCCAGCATCTAAGCCATGGGAAGGCCCATTCCTCTGCACAAACTGTCGGAAGAAAAGAGATGCCATGGAAGGAAAAAGGCCTAGCAGACCCACCGTTACTGCATAG 1287 0.4522 MSKIELSRMKTPAVPLATLIGRELRNENVEKPFVKYGQAGLAKKGEDYFLIKTDCHRIPGDSSTVFSVFAIFDGHNGISAAIFAKENLLSNVLSALPQDISRDAWLQELPRALVVGFVKTDIEFQQKGETSGTTATFVLIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENAEEREHVTASGGEVGRLNVYRGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDLPVLPPIPRKKHNMLTSFLFGKKSENSTNKATNKLSAVGVVEELFEEGSAMLAERLGKDFPFNKNSGIFRCAVCQVDQPPGDGLSVNSGPFFSPASKPWEGPFLCTNCRKKRDAMEGKRPSRPTVTA 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3203g00053 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Gabi3203g00053 428 SMART PP2C_4 23 295 IPR001932 -
Gabi3203g00053 428 SMART PP2C_SIG_2 50 297 IPR001932 -
Gabi3203g00053 428 Gene3D - 33 301 IPR036457 -
Gabi3203g00053 428 ProSiteProfiles PPM-type phosphatase domain profile. 32 297 IPR001932 -
Gabi3203g00053 428 CDD PP2Cc 43 297 IPR001932 -
Gabi3203g00053 428 Pfam Protein phosphatase 2C 66 280 IPR001932 -
Gabi3203g00053 428 SUPERFAMILY PP2C-like 37 297 IPR036457 -
Gabi3203g00053 428 PANTHER PROTEIN PHOSPHATASE 47 296 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3203g00053 Gabi-Chr3203 381185 383427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3203g00053 1 427 PP2C-type Phosphatase Gene Family AT1G09160 76.815 0.0 661