Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3203g00044 ATGGTAATCATGGATCTCAATGTGAAGGAATTGGAATTGAGTGAGAACAAGAAGTGTTGTACTGATTGCAGAACCACCAAAACCCCACTCTGGAGAGGAGGACCAGCTGGACCCAAGGTCATCACTCATCACTCATCCTCAACAATACCCATTTCTAATTTCTACTCTTTTTTGCTATTGATTTTGTTTGGGTACCGGAAGAGAAGGGCTTCTATGGTGGGAATGAACAAAGGACAAGAAAAGAAGAGAGAGAGAGCACAAAACGGCACCAGCAGCAGCAGCAGCAGCAGCTCTGGTGATACGGTTGGTGTTGGTGGCGGAAGAGAATTAAGGGAGTCTTTAAAAGTGAAGTTAATGGCGTTGGGTGAGGAGGTTTTGTTGCAGCGATCACCCTCTGTTCTGAAGAAACAGAGGAGGAACATGTTAGGTGAAGAGGAACAAGCAGCTGTTTGTTTGATGGCATTGTCCTGCGGCTTTGTTTTCGCTTGA 489 0.456 MVIMDLNVKELELSENKKCCTDCRTTKTPLWRGGPAGPKVITHHSSSTIPISNFYSFLLLILFGYRKRRASMVGMNKGQEKKRERAQNGTSSSSSSSSGDTVGVGGGRELRESLKVKLMALGEEVLLQRSPSVLKKQRRNMLGEEEQAAVCLMALSCGFVFA 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3203g00044 162 MobiDBLite consensus disorder prediction 74 106 - -
Gabi3203g00044 162 Gene3D - 13 53 IPR013088 GO:0006355|GO:0008270
Gabi3203g00044 162 Pfam GATA zinc finger 20 39 IPR000679 GO:0006355|GO:0043565
Gabi3203g00044 162 ProSiteProfiles GATA-type zinc finger domain profile. 14 37 IPR000679 GO:0006355|GO:0043565
Gabi3203g00044 162 PANTHER OS01G0976800 PROTEIN 11 39 - -
Gabi3203g00044 162 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3203g00044 Gabi-Chr3203 331753 333148 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3203g00044 13 162 C2C2-Gata Transcription Factor Family AT3G06740 41.060 4.82e-22 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Gabi3203g00044 GATA 6.5e-07 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3203g00044 - - qsa:O6P43_011056 160.614