Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3203g00041 ATGGATCGGGAAGGAGGAGGATCCAACGGTGGATCTTGCTACTACTCGATTCTAGGGATTCGGAGGGACGCCTCCTTCTGTGATGTACGCGCTGCTTACCGCAAGCTTGCCATGAAGTGGCACCCGGACAAATGGGCTCGGAACCCTGCGATCGCCGGAGAAGCCAAACGGCGGTTTCAGCAAATCCAGGAAGCTTACTCGGTTCTTTCCGATCAGTCTAAAAGGTCAATGTACGATGCCGGCTTCTATGACCCTTTAGAGGAAGATGACAAAGAATTCTGTGATTTCATGCAAGAAATGATTTCAATGATGAACGATGTCAAAGACGAGGGGGACAGTTTGGAGGACCTACAAAAGATGTTCGTGGAGATGGTGGGTGGGGATGGGATGAGCTTTGACTTGAACCAGGATCAGACGGCGGCCAAGAGAGGACGCTGCGGTGGATCAAGAGGCAACGCCGCCAAGCGCACCAACTCTTGCTGTTAG 486 0.5226 MDREGGGSNGGSCYYSILGIRRDASFCDVRAAYRKLAMKWHPDKWARNPAIAGEAKRRFQQIQEAYSVLSDQSKRSMYDAGFYDPLEEDDKEFCDFMQEMISMMNDVKDEGDSLEDLQKMFVEMVGGDGMSFDLNQDQTAAKRGRCGGSRGNAAKRTNSCC 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3203g00041 161 PRINTS DnaJ domain signature 15 33 IPR001623 -
Gabi3203g00041 161 PRINTS DnaJ domain signature 54 74 IPR001623 -
Gabi3203g00041 161 PRINTS DnaJ domain signature 33 48 IPR001623 -
Gabi3203g00041 161 SMART dnaj_3 12 74 IPR001623 -
Gabi3203g00041 161 ProSiteProfiles dnaJ domain profile. 13 82 IPR001623 -
Gabi3203g00041 161 Pfam DnaJ domain 14 79 IPR001623 -
Gabi3203g00041 161 SUPERFAMILY Chaperone J-domain 13 85 IPR036869 -
Gabi3203g00041 161 CDD DnaJ 13 71 IPR001623 -
Gabi3203g00041 161 ProSitePatterns Nt-dnaJ domain signature. 59 78 IPR018253 -
Gabi3203g00041 161 Gene3D DnaJ domain 12 138 IPR036869 -
Gabi3203g00041 161 PANTHER PUTATIVE, EXPRESSED-RELATED 8 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3203g00041 Gabi-Chr3203 315181 316689 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3203g00041 13 80 C2H2 Transcription Factor Family AT1G74250 40.580 1.04e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3203g00041 - - mtr:11423150 275.018