Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3203g00040 ATGGAATCAAAAAGGCAATCTCAACAGGAGGGTGATGAAAGTGGGCTTCAAATTCTAGCTCATCCTTCAAAGCGGAGACGTGAAGATTCACAACAGTCGAAGACCTTTATCATTGGAAATTTGAGGTCTTTGTTCCACTTAACCTCTGATGACATAGTGCCGCCCGTGAAAGATTTAGTTCAAAGATTGGTACGAGAGGAGTTGAAACGACAATTAAGTTGCGGATCTGGTGGTGGAAGAGTTTTGCAATTGTGCTTCATGAATAAATTGCCTCCAACAAATTACACACTATCCGAAATCACAGCTGAGGGAGGATTACCACTTCAAATTGAGCTGCGTGATGCTAAGTCTCAGCAACGCATAGTCAGGGAAGAATGTTACCCCATGAAGATCCGGATCTGTGTCTTAAATGGTGACTTTGGATCCAATAAGAATGAGGATTGGACAGCAGAGGAATTTAATTCCCAAACTTTAAGTCCAAGAGAGGGAAAAGGACCATTACTGAATGGAGATACGGTTATTACACTAGAAAATGGAGTTGGTTACATCACTGAGAAGATTGTGTTTACTGATAACTCGAGCTGGACAAGAAGCAAATCGTTCCGGTTAGGAGTTAAAATAGTGCAATCTAATTCCATTGAAGCAGACATTAGGGAAGGTAGAAGTGAACCTTTTAAGGTCAAGGATATCAGAGGAGAGGCCACTGAGAAGCACTACCCTCCATCTCTCAATGATGAAATATGGCGTTTGACAAAGATACGAAAAGATGGGGAAATCCATAAGCGATTGCGTTTGCATGGAATACACACTGTTGATGATCTGTTGCAGCTGCATCATACCAACCCATCTTCTTTGCAAGAGAAATTTGGCAAAATTAAAACAAAACTACGGGAGGCAATTATTAAGCATGCCAAAACATGTGTTGCTGATCGTTCAAAGAATGCTCTCAACTCTGACACTTTGGTGGATGGTTACAGAAATGTCCAAGATTTGATGACGCCAGTTATAGACAGCTTGTCCAGCCTATTGGCAAGTCTACAATCTGCGGGGCAATGTGGTGCTCAAGTTCAGTTACCTACTGCACGGCAAGATCAACTAGAAAAAAGGCAAGATTTGAGTCAACCGTGTACCTCCACATCACACATGGGTGAACCAGCACATAATACCCAAGTAGGTTTTGTTGAAGAGCTGATATCGGGAATGTGCACGGAAGAGAATATTGCTATGTCGCCTATTGTATCACACGTTCCAAAGCAAATGCCTGATGATTATTCAACGGGAAATGATATTTTTCCTTTTCCTTCATAG 1308 0.4174 MESKRQSQQEGDESGLQILAHPSKRRREDSQQSKTFIIGNLRSLFHLTSDDIVPPVKDLVQRLVREELKRQLSCGSGGGRVLQLCFMNKLPPTNYTLSEITAEGGLPLQIELRDAKSQQRIVREECYPMKIRICVLNGDFGSNKNEDWTAEEFNSQTLSPREGKGPLLNGDTVITLENGVGYITEKIVFTDNSSWTRSKSFRLGVKIVQSNSIEADIREGRSEPFKVKDIRGEATEKHYPPSLNDEIWRLTKIRKDGEIHKRLRLHGIHTVDDLLQLHHTNPSSLQEKFGKIKTKLREAIIKHAKTCVADRSKNALNSDTLVDGYRNVQDLMTPVIDSLSSLLASLQSAGQCGAQVQLPTARQDQLEKRQDLSQPCTSTSHMGEPAHNTQVGFVEELISGMCTEENIAMSPIVSHVPKQMPDDYSTGNDIFPFPS 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3203g00040 435 PANTHER OS02G0177800 PROTEIN 17 329 IPR012416 GO:0005516
Gabi3203g00040 435 Pfam Calmodulin binding protein central domain 242 307 IPR046830 -
Gabi3203g00040 435 Pfam Calmodulin binding protein-like N-terminal domain 82 229 IPR046831 -
Gabi3203g00040 435 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3203g00040 Gabi-Chr3203 309671 312753 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3203g00040 59 308 Calmodulin-binding Proteins AT5G57580 42.164 4.25e-61 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3203g00040 - - gmx:100798493 344.354