Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3203g00036 ATGCCATCCTCAATGTTCCCCAGAGGAAGGGTTAATCATGCTGGCATATCTGGAGCCAAACCCTTTCAGTTGCGTTTTCCTAAAAAGTTGCCTGATACAATTTTTACCATGTCTAAAATATTAGCAGAGGACAAATCACCTCTTCATATTGTTCTATTTGATGTTAGATCTCAGTCTGTAGTCAATGATGGTCCCCTCTCCTCAAAAAAGATAGAGATCTGTGCTCTCAATGGTGAGTTTGGATCCAATGGCAGTGAGGATTTGAATGAAGGGGAATTCAATGCCAATATCTTACGTGAAAGAGATGGTAAAGGGCCACTATTGATTGGAGAGAGGTTTATTACTTTAAAAAATGGAGTTGGTTGCATTACTAAAATCATCTTCACTGATAACTCGAGATGGCTAAGAAGCAGAAAGTTCAGGCTAGGAGCCAAAGTTGTGCAACCAACTTCCAGTGGAGAAAACATTAAGGAAGGTAGAAGTGAACCTTTTGTGGTCAAAGACAACAGAGGAGAGCCTAACAAGAAGCACCACCCTCCATCCTTGAATGATGATATCTGGCGTTTGGAGAAAATTGCTAAAGAAGGAAAAATCCACCAGCGGCTCTCTCTCCATGGAATTCACACTGTTAAGGATCTCTTGCAGTTATACATAACCAACGCATCTTCGTTATATGAGAAATTTGGCAACATTCAGAAGAAGTCATGGTTAGCAATTACTGAACATGCCAAGGCCTGTGTGATAGATGATTACAAGCTCTACGGCTATCACACAGCAGAACAACCAATAGGCCTGCTATTCAATTGCATCTACGTCGTTGTGGGAGTGACATTTGATGGACAAGATTATTATTCACCAGATGCTCTCACCCCCAGCGAGAATCATTTGGTAGAAATAGTGAAGCAGCATGCTTACAAAAATGTCAATAACTTGAAATCAATTGATGAAACTTTCCTGAACTGCTTAAACCTAGCGGCATTTCTAAAAGCAAGGCAGTCTGACGCTCCAGACCAAGATGTGCAACAGATTAATATCTCAACAGCACAAGTTGCATATAATGGCCAACAACAAACATGGACAGGTCATACTCCACCAATTATCTCTGCTTCAAATATTGATGAAGGAATGCATAATTACCAAATCTGCGCTGATCCACTGCCAGACAAAAGAGAAGTGCCACCAAACAGTCAGGTGGAGGATGAATTTTCCTCTGGAATGTACACTGAAGGGGGTAGTTGTTGGAACCTTAATGGATCATATTTTCCAGCTATGCAATGTGGTTATTCGACAGAGAATGAGAGTTCAGAGTTTCAATTCATAAATGATTATCCTCCTTATACAACATGGGGGCTAGAAAATGGCATTTGCTTTGGTTCTGATGAAGCAGAATGTAGCAGCCATTCTCCTTTCCTCAATTCTGCCCTGGATATATCCAACAGTGAGAAACCGAAAGCGGTGTGGCAGAAGATTCGGGTTGCTCTATGGGTCTTATCAGTGAGAAGGGATGCAGCTGCCAAAAAGAAAGCAAAGCTGTTTTGCTATGACTATTAG 1551 0.4126 MPSSMFPRGRVNHAGISGAKPFQLRFPKKLPDTIFTMSKILAEDKSPLHIVLFDVRSQSVVNDGPLSSKKIEICALNGEFGSNGSEDLNEGEFNANILRERDGKGPLLIGERFITLKNGVGCITKIIFTDNSRWLRSRKFRLGAKVVQPTSSGENIKEGRSEPFVVKDNRGEPNKKHHPPSLNDDIWRLEKIAKEGKIHQRLSLHGIHTVKDLLQLYITNASSLYEKFGNIQKKSWLAITEHAKACVIDDYKLYGYHTAEQPIGLLFNCIYVVVGVTFDGQDYYSPDALTPSENHLVEIVKQHAYKNVNNLKSIDETFLNCLNLAAFLKARQSDAPDQDVQQINISTAQVAYNGQQQTWTGHTPPIISASNIDEGMHNYQICADPLPDKREVPPNSQVEDEFSSGMYTEGGSCWNLNGSYFPAMQCGYSTENESSEFQFINDYPPYTTWGLENGICFGSDEAECSSHSPFLNSALDISNSEKPKAVWQKIRVALWVLSVRRDAAAKKKAKLFCYDY 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3203g00036 516 MobiDBLite consensus disorder prediction 151 181 - -
Gabi3203g00036 516 Pfam Calmodulin binding protein central domain 181 246 IPR046830 -
Gabi3203g00036 516 Pfam Calmodulin binding protein C-terminal domain 252 313 IPR046829 -
Gabi3203g00036 516 PANTHER OS02G0177800 PROTEIN 18 380 IPR012416 GO:0005516
Gabi3203g00036 516 MobiDBLite consensus disorder prediction 160 181 - -
Gabi3203g00036 516 Pfam Calmodulin binding protein-like N-terminal domain 22 169 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3203g00036 Gabi-Chr3203 289072 292293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3203g00036 19 309 Calmodulin-binding Proteins AT5G57580 43.003 2.24e-76 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3203g00036 - - gmx:100805759 684.871