Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3203g00034 ATGGGGATGGAGAAAAAACGTTCCAAGGGAAGCTTCCTCAGCTTGTTTGATTGGAATGCCAAATCTCGAAAGAAGTTGGTTTGGAACAATCCTACCTTACCTGAGGCTTCAAAGCAAGGAAAAGAAAATGTGGAGAACTTGCCCAAGTCGCAGCTCAATAGGGTAAAGGTGGATGAAAATGGTGCTAGTTCAAGTAATATTGCAAGTTGTGATTTTAATTCCACCCTCTCAATTTGTAGTGATGAAGGATGTGGGAATAAAGCCCCTGGGTTAGTAGCGAGACTAATGGGTTTGGATTCATTGCCAGCTTCGGCAGTCACTGACCTCTCCTGCACTTTGTTGAATGGCTCTAACTCTCATGGAGCTCCTCATCCTCATGAGGGTGCTCTTCATTCAATGGATGACGTGCGCCATGTGGAATACATAAACAAGGCACCTAAGCTGGAGAAGTCTTCTTTGGGTGCCATGGAATCTAGGGCACAGAAAGTGGAAAACCGGCCAATAAAGAGATTCCAAACTGAAATGTTGCCTCCAAAGTCAGCTAAACCCATTCCAGTTACTCACAATAAACTCTTGTCTCCTATCAAGAGTCCTGGTTTTCAGACACCAAAGAATGCAGCAGATATAATGGAGGCAGCTGCTAAGATAATTGAGGCAAGCCCTCGGCCATATATGAAGAATAGAATGTCTTCAGTTGGGCCCTCATCTGTTCCCTTGAGAATTATTGATTTGAAAGAGAGATTGGAAGCTGCACACTATGCATCCATGCCTGAAAAGCTCATGGATCCAAGCACTGCCAACCCTGCAAATGGCAAGTCTAGTGAGACGAGCAGTAATTTGTATAAATGTACTTCAGCATTCAAGAGTTCAAGAGATTCAGAAAAAAATAGTTCTTGTCATCTAGCCAGTAATGGAAAATCAGTTTCACTTGCAATACAAGCCAAAACCAATGTTCAGAGCCAAGTTACATTGTCTTCAAATGTTAATAGGAAATATATGAAGCAGAAAGAACAGAACGGGATGAAGTCAAACCAGTTCTTGAGGAGCCAGAAACCAAGTACACACCAAGCCATGCAGCAGAGAACTTGCACAAGCCGGAAAAGCAATGTTCTTGCGCAGAATAATCAAAAGCAAAATGGAGGGACCACCAAAGGTAAATCTACTTCAAAAATAGATTCCAATAAGCCAACAACACAAGCTTCGTCTTCAGAAAATTCTTCTGGAATAAGGAAGGCGTCAAACAAGGGTGCTGTAAATGCCAATATTCAGCCTAAAAGGTCAACCACTAGGGCAACTGATAACAAAAATGAGTTTCCAGCATCCAAAACAGAGAGTATTTCCCGGAAGAAAAAGTATATCAGCAGAGGTGTTCATGAGGCAAGAGGTCCTGATAATGCAGTTAATAATTTTGAAAGCAAGTCCATAAAATGCAATATTACAACTGATGGAAGTATTGATCAGGATGCATTTAACATGAAAGAAAGCAAGGATGTTATCTCATTTACTTTTACATCTCCCTTGAGGAGAAGCTTGCCTGAGTCACCATCCTCTACTGAGCAAGTGATGGGAACGAGAAATAAAATTGGTGTTCATTCTCTTGGGCAAAGTGATAACTTTTATCCCAAAAAATTATCATTATCTCCTATGATAGACAGTGATGCTTTAAGTGTCCTGTTGGAGAAAAAGTTGCAAGAATTGACATCTAGAATTAACTTACCTCAATGTACCCTGGCCACAGAGGGCTCTTCTGCTGGTTTGAGATCTAGTTTGCAAGACAAAGTTTCCAGTATGGTAAGCACCACTTCTAGGGAACAAGACCAAAGCTTTCACCCTGACCTGTTCAGTGATAAACTGGATAGCATGCATGAGTATCGTTGCTGTTCAAGTGATGATCCAGTGCTTAATATGAATCAGCAACTGCAGACATCAGATGTAATGGAAGATCCTTGCTGTAGCAGCAACAGTGCAAGTGGAAATGATCTAGCTGTTACAGTTTCTGAAACTTCTTTTGTCAGTGAAAGTTACTTGAATAGTGAAGACAGTTCATATGGCAGCAGATTTGATTCTTCCATGCAAGATGAAGAAATATCTAATTTTTCCCAGATAAATGAATCTGTATCACTTGAAAATGAGGTGAAATGGCCAGAGCTAAGCTCTTCCACATTGGTGGGGGGAAATGTGGTCAAACAATTAAGCGGAATTTCAAATTTGGTAGATTTTAAAAGATTAAGGAACATGGAACTTGAATATGTACAGGATATACTTAGCAATGCAGAGTTTATGGCTGAAGAATTTGTCATGGGTCACGCTAATACGGTCATAATGCCAAATCTCTTTGATCTGTTGGAGAATCAGAGTAATGGAACAGAAAACTATGGAGAAGAGTACTCCAAGGTTGAAAGGAAGGTTTTATTTGACATTGTAAGCGAGTGCCTGGAGTTGAGATGTAGGAAAGCTTTTGTTGGAAGGTGCAAAGCATGGACTAGATGGGTGACATCAGTTCAGAGGAAGAGCTGGTTGGCAGAGGAATTGTACAAGGAGATGCTGGCTTTTAAAAGCATGGAAGAGGTAATGGTAGATGAGCTTGTCAGCAAGGACATGAGCACTGGATGCGGTAGATGGCTTGACTTTGACGTTGAAGCATTTGAAGAGGGTTTAGAGGTTGAGCAGGACATACTAGATTATATGATTAATGAATTGGTTTTTGATTTGTTGCTTGTTTAA 2724 0.4079 MGMEKKRSKGSFLSLFDWNAKSRKKLVWNNPTLPEASKQGKENVENLPKSQLNRVKVDENGASSSNIASCDFNSTLSICSDEGCGNKAPGLVARLMGLDSLPASAVTDLSCTLLNGSNSHGAPHPHEGALHSMDDVRHVEYINKAPKLEKSSLGAMESRAQKVENRPIKRFQTEMLPPKSAKPIPVTHNKLLSPIKSPGFQTPKNAADIMEAAAKIIEASPRPYMKNRMSSVGPSSVPLRIIDLKERLEAAHYASMPEKLMDPSTANPANGKSSETSSNLYKCTSAFKSSRDSEKNSSCHLASNGKSVSLAIQAKTNVQSQVTLSSNVNRKYMKQKEQNGMKSNQFLRSQKPSTHQAMQQRTCTSRKSNVLAQNNQKQNGGTTKGKSTSKIDSNKPTTQASSSENSSGIRKASNKGAVNANIQPKRSTTRATDNKNEFPASKTESISRKKKYISRGVHEARGPDNAVNNFESKSIKCNITTDGSIDQDAFNMKESKDVISFTFTSPLRRSLPESPSSTEQVMGTRNKIGVHSLGQSDNFYPKKLSLSPMIDSDALSVLLEKKLQELTSRINLPQCTLATEGSSAGLRSSLQDKVSSMVSTTSREQDQSFHPDLFSDKLDSMHEYRCCSSDDPVLNMNQQLQTSDVMEDPCCSSNSASGNDLAVTVSETSFVSESYLNSEDSSYGSRFDSSMQDEEISNFSQINESVSLENEVKWPELSSSTLVGGNVVKQLSGISNLVDFKRLRNMELEYVQDILSNAEFMAEEFVMGHANTVIMPNLFDLLENQSNGTENYGEEYSKVERKVLFDIVSECLELRCRKAFVGRCKAWTRWVTSVQRKSWLAEELYKEMLAFKSMEEVMVDELVSKDMSTGCGRWLDFDVEAFEEGLEVEQDILDYMINELVFDLLLV 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3203g00034 907 MobiDBLite consensus disorder prediction 336 451 - -
Gabi3203g00034 907 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 903 - -
Gabi3203g00034 907 MobiDBLite consensus disorder prediction 255 278 - -
Gabi3203g00034 907 Pfam Domain of unknown function (DUF4378) 747 899 IPR025486 -
Gabi3203g00034 907 MobiDBLite consensus disorder prediction 336 441 - -
Gabi3203g00034 907 Pfam DUF761-associated sequence motif 80 105 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3203g00034 Gabi-Chr3203 272933 277213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3203g00034 3 905 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 32.127 2.39e-105 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3203g00034 - - gmx:102663635 1270.76