Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3203g00024 ATGGTTTGCCAGGAAGAGTTGTTGATTGAAAAAGTATGCAAACTCTATGAACAAATCTCAAGCCTTGAGAGTCTCAAACCCTGCAAAAATGTCGACATGCTTTTCACCCAACTTGTCCTCACATGCATACCACCTAGTCCTATTGATGTCACCAAACTCCCCAATACTGTGCAAGAGATTAGATCCCATCTTATAAGGCTCTCTGGTGAAGCTGAAGGCCATTTGGAGACCCATTACTCAACCATCTTAGGCTCATACCACAAACCACTTGATCATCTCCATATTTTCCCCTACTATTCCAACTACCTCAAACTTGCTCTCCTTGAGTTCACTATCCTTAACCAACACTGCACCAATGTCCCTAACAAAATTGCCTTTGTGGGTTCAGGACCCCTTCCCCTTACTTCAATTGTCTTGGCATCAAATCACTTACCTTCCACCACTTTTCACAACTATGACATCGACCCTTTAGCCAATTCCAATGCTCTGAGCTTGGTTTCCTCTGACCCTGACTTGTCAAAGCGTATGCTTTTCCACACCAATGACATATTGGATGTGTCAAACCCTTTGAAAGACTATGAAGTTGTTTACTTGGCAGCACTTGTGGGTATGGACAAGGAGGGAAAGAATCGAATCATTGATCACTTGGCTAAGTACATGGCCCCGGGAGCACTTTTGATGCTAAGGAGTGCTCATGGGGCTCGTGCTTTTCTCTACCCAGTTGTTGAACCTTGCGATCTTCAAGGCTTTGAGGTTCTCTCTGTGTTCCACCCCACAGATGAGGTTATCAATTCAGTTGTCATAGCACGTAAATGTCCTATGCCTAAACACTCACTTGATCACCAAGGCCTCGGTTCAATGATCCTACCAAACAAGTGTTCTGAGATCCAAGTCTTCAACCACGGGAATATGATTGAGGAATTGACCCTTGAGGAGCAACTCTCCTAA 948 0.443 MVCQEELLIEKVCKLYEQISSLESLKPCKNVDMLFTQLVLTCIPPSPIDVTKLPNTVQEIRSHLIRLSGEAEGHLETHYSTILGSYHKPLDHLHIFPYYSNYLKLALLEFTILNQHCTNVPNKIAFVGSGPLPLTSIVLASNHLPSTTFHNYDIDPLANSNALSLVSSDPDLSKRMLFHTNDILDVSNPLKDYEVVYLAALVGMDKEGKNRIIDHLAKYMAPGALLMLRSAHGARAFLYPVVEPCDLQGFEVLSVFHPTDEVINSVVIARKCPMPKHSLDHQGLGSMILPNKCSEIQVFNHGNMIEELTLEEQLS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3203g00024 315 Gene3D Vaccinia Virus protein VP39 6 273 IPR029063 -
Gabi3203g00024 315 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Gabi3203g00024 315 PANTHER NICOTIANAMINE SYNTHASE 3 4 309 IPR004298 GO:0030410|GO:0030418
Gabi3203g00024 315 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3203g00024 Gabi-Chr3203 209245 210594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3203g00024 1 312 Nicotianamine Synthase Gene Family AT5G04950 60.000 1.97e-133 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3203g00024 K05953 - gmx:100794250 538.88