Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3203g00017 ATGGCGTCTTTGCAACCAAACGTCGATTCCAGTAATTCAGATACATTGCAAGAATCCAATCGCATGAAGCGCCGGAAAATCATAGATCACAATTCTCTCAGTCTCATTCCATGGAGATCAGAAGCCGAACAGAGGATCTACTCCTCCAAGCTCGTCGACACTCTCCGCCGGAGCCATCCGCCGCCGTCCAAGTCGATTGCCGTCCGCGAAGTTCGCGAAGCTGCCGACCGAGTTCTGGCCGCGACGGCCAAGGGCCGAACTCGGTGGAGCCGTGCGATTCTGGCGAGTCCGCTCCAGTTGCAGAGGCAGCACAAGAAGGTGAAGAAGGCCGCTAACGGATTCATGAAGAAGAGGACTCCGGATATTTGGAGAAGGTTACCGGCGGTGCAGAAGAAAGCGCGCGTTCTCAGCAGGTTAGTCCCCGGTTGCCGGAAGGCGTCGTTGCCGAATCTTCTGGAAGAAGTCACTGACTATATATCGGCCTTGGAGATGCAAGTGCGTGCGATGACGGCTCTCACCGAGCTTCTCGACGGTGGTGCGCCGCCGCCTACTCAGCTTGGCTCCGCTTGA 570 0.5667 MASLQPNVDSSNSDTLQESNRMKRRKIIDHNSLSLIPWRSEAEQRIYSSKLVDTLRRSHPPPSKSIAVREVREAADRVLAATAKGRTRWSRAILASPLQLQRQHKKVKKAANGFMKKRTPDIWRRLPAVQKKARVLSRLVPGCRKASLPNLLEEVTDYISALEMQVRAMTALTELLDGGAPPPTQLGSA 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3203g00017 189 MobiDBLite consensus disorder prediction 1 23 - -
Gabi3203g00017 189 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 125 182 IPR036638 GO:0046983
Gabi3203g00017 189 MobiDBLite consensus disorder prediction 1 17 - -
Gabi3203g00017 189 CDD bHLH_AtIBH1_like 124 173 IPR044549 GO:0006355
Gabi3203g00017 189 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 39 176 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3203g00017 Gabi-Chr3203 134530 135532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3203g00017 3 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 44.498 2.76e-39 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3203g00017 - - gmx:100783462 221.476