Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3201g00022 ATGACAAACTTGCTCCCACTAATCGTCTATGTGTTATTGTTCTTTCTTGTCTCAGTTTCATCCCAACATGACCAGCTTCTGTATGCTGGATTCAAGGATATGGAAAGTAACAACTTAACCTTGAATGGTATAGCAGAAATAGAGCAAAATGGAATACTGAAACTCACAAATGAGACTAGTAGATTAATGGGTCATGCTTTTTATCCAACCCCTTTTCAGTTCAAGAAATCAAGTGATGGTAAAGTTTTCTCCTTTTCTTCCTTATTTGCTCTTGCTATTGTCCCTGAGTATCCTAAGCTTGGTGGGCATGGCCTTGCTTTTACCATTGCAACTTCCAAGGATCTCAATGCTCTTCCAAGCCAGTATCTTGGTCTCCTTAACTCAACTAGCATTGGAAACTTCTCCAACCACCTTTTTGCTGTTGAGTTTGACACTGTTCAAGACTTTGAGTTTGGGGATATCAATGACAACCATGTTGGAATTGACATCAACAACTTGAAGTCCAATGCTTCTGCCACTGCTGGTTACTACACTGAGGATTCAACAAAACAAGATCTCAATCTCAAAAGTGGGAAACCAATTCTAGCTTGGGTTGATTATGATTCTGCTGTTAATATTATCAGTGTCACACTTTCTGCATCCTCTTCCAAACCCAAAAAACCAATCTTGTCGTACTCTGTAGATCTCTCACCAATCCTTGAGGAATCTATGTATGTTGGATTCTCTGCTTCAACAGGGTTGCTTGCTAGCTCCCATTACATCTTGGGTTGGAGCTTCAAGATCAATGGGCCAGCACCACCCCTTGATCTCTCTTCTCTCCCACAGCTTCCGGGGCCAAAGAAGAAGCACACATCTATGATAATTGGGGTTTCAGTTTTTGTAGTTGTTCTTGTACTGTCTGCTATATTAATTGGCATTTACATGTATAGAAAAATCAAGAATGCTGATGTTGTAGAAGCTTGGGAGTTTGAGGTTGGTCCACACAGGTACTCCTACCAAGAGCTCAAGAAAGCCACAAAAGGTTTCAAGGACAAGGAGCTACTTGGGCAAGGTGGTTTTGGTAAAGTTTACAAAGGAACATTGCCAAGTTCCAAGACCCAAATAGCTGTAAAGAGGGTTTCACATGAATCAAAACAAGGCCTGCGAGAATTTGTTTCAGAAATAGCCAGCATAGGCCGGCTTCGCCACCGGAATTTGGCTCAGTTGCTAGGGTGGTGTCGCTGTGGCGGTGACCTCCTCCTTGTGTATGATTTCATGGCTAATGGGAGCTTAGACAAGTACTTGTTTGATGAGCCAGAAATCATTCTAAGTTGGGGGCAGAGGTTCAAGATCATAAAGGATGTTGCTTCAGCTCTTTTGTATCTGCATGAAGGCTATGAGCAGGTGGTTATACACAGAGATGTGAAGGCTAGCAATGTGCTGCTAGATAGTGAACTCAATGGAAGACTAGGAGATTTTGGGTTAGCAAGATTGTATGAACATGGGGCTAACCCAAGTACCACAAGAGTGGTGGGTACCTTAGGCTATTTGGCACCTGAGTTTTCTAGAACAGGGAAGGCCACTCCTAGCACAGATGTTTTTGCATTTGGTGCGCTTTTACTTGAGGTGGCATGTGGGCTCAGACCTGTTGAGCCAAAGGCATTACCAGAAGAGATGGTTTTGGTAGATTTTGTGTGGAATAGATACAAAGAAGGAAGAATACTTGATTTGGTGGACCCAAAACTAAATGGTGATTTTGATGAAAGAGAGGTTCTCATGGTGTTGAAATTGGGGCTTATATGTTCAAATGGTGCACCCAATGCTAGGCCTACCATGAGGCAGGTGGTGAGGTTTTTGGATGGAGAAGATGGTTTGCCAAATGAGTTGAGAAAACCAAGAGAGATAGGTCACCAGGAAGGTTTTGATGAATTCTTGCACTCACTTGAATCTTCTTTGTCTGATAACATGAGCACAAATTCCTATAATAGAAATAGAGAAACAGATGCTAGTTTTCCTTCTTTTGCTAATTCACCTCTTTTTTCTCTCCATGGTAGAGGGGAAACAAGGTGA 2049 0.4217 MTNLLPLIVYVLLFFLVSVSSQHDQLLYAGFKDMESNNLTLNGIAEIEQNGILKLTNETSRLMGHAFYPTPFQFKKSSDGKVFSFSSLFALAIVPEYPKLGGHGLAFTIATSKDLNALPSQYLGLLNSTSIGNFSNHLFAVEFDTVQDFEFGDINDNHVGIDINNLKSNASATAGYYTEDSTKQDLNLKSGKPILAWVDYDSAVNIISVTLSASSSKPKKPILSYSVDLSPILEESMYVGFSASTGLLASSHYILGWSFKINGPAPPLDLSSLPQLPGPKKKHTSMIIGVSVFVVVLVLSAILIGIYMYRKIKNADVVEAWEFEVGPHRYSYQELKKATKGFKDKELLGQGGFGKVYKGTLPSSKTQIAVKRVSHESKQGLREFVSEIASIGRLRHRNLAQLLGWCRCGGDLLLVYDFMANGSLDKYLFDEPEIILSWGQRFKIIKDVASALLYLHEGYEQVVIHRDVKASNVLLDSELNGRLGDFGLARLYEHGANPSTTRVVGTLGYLAPEFSRTGKATPSTDVFAFGALLLEVACGLRPVEPKALPEEMVLVDFVWNRYKEGRILDLVDPKLNGDFDEREVLMVLKLGLICSNGAPNARPTMRQVVRFLDGEDGLPNELRKPREIGHQEGFDEFLHSLESSLSDNMSTNSYNRNRETDASFPSFANSPLFSLHGRGETR 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3201g00022 682 Pfam Legume lectin domain 25 273 IPR001220 GO:0030246
Gabi3201g00022 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Gabi3201g00022 682 CDD STKc_IRAK 348 614 - -
Gabi3201g00022 682 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Gabi3201g00022 682 SUPERFAMILY Protein kinase-like (PK-like) 323 642 IPR011009 -
Gabi3201g00022 682 CDD lectin_legume_LecRK_Arcelin_ConA 25 263 IPR001220 GO:0030246
Gabi3201g00022 682 FunFam Lectin-domain containing receptor kinase A4.3 327 418 - -
Gabi3201g00022 682 Gene3D - 25 262 - -
Gabi3201g00022 682 PANTHER - 31 619 - -
Gabi3201g00022 682 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Gabi3201g00022 682 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 281 IPR013320 -
Gabi3201g00022 682 SMART serkin_6 342 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3201g00022 682 FunFam L-type lectin-domain containing receptor kinase S.4 22 267 - -
Gabi3201g00022 682 ProSiteProfiles Protein kinase domain profile. 342 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3201g00022 682 FunFam L-type lectin-domain containing receptor kinase S.4 419 625 - -
Gabi3201g00022 682 Pfam Protein kinase domain 342 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3201g00022 682 Gene3D Transferase(Phosphotransferase) domain 1 419 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3201g00022 Gabi-Chr3201 330193 332370 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3201g00022 19 625 Receptor kinase-like Gene Family AT3G55550 62.052 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gabi3201g00022 Pkinase 6.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3201g00022 - - gmx:100801247 1084.71