Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3194g00017 ATGAGTTCCAATTCCAAACTGAATCCTCTTTCCACAGAGGTAGCAAAGGATGAAGCATACCGCTATGCTTTATTACTTAGTACTATTCGAGTCTTCCCTGCATTTCTAAATGCTGCTGTTGATCTCAATTTGTTTGAGATTATAGCTAAGTCTAGTTCATATGGTTCAAACATGTCTGCATCTGAGATTGCTTCTCATATGCCAAACCAACACCCAGAACTAGCCAATAGGCTTGAGCGCATGTTGCCTTTGTTGGCTAGTTACTCTCTTCTAACTTGTTCAATTCGCACCAATGAAGATGGTAAGAATGAAAGAGTTTATTCTCTCTCACATGTTGGTGAATACTTTGCATATGATAAAGTTGGAGGTTCTACAGCTCCACTCTCAACTTTATTGCATAGAGGATTTGATGCCATGTGGATGAATGTAAAGGATGCATTTGAAGATGCTGATAGTAATATATATGCAGAGAAAGTCTTTGGAATGCCATTGTATAAACATATAGAGACAGATAAAGAGCTGAGTGATATTTTTATGAAAGCAATGGCTCATGTCACCCCATTAGAAATGAAAATAATCCTTGAAATATATAAGGGATTTGATGGAGTTTCAACTCTGGTTGATGTTGGAGGTGGAATTGGACAAGCCTTAAAAGGGATTATCTCAGATTATCCTTCAATAAAAGGAATTAATTTTGATTTGCCTCATGTGGTTCAAAATGCCCCACCTCATCAAGGGATAGAGCATATTGGAGGAGATATGTTTGAGTGTGTTCCAGAGGGTGATGCTATTATGCTAAAGGAAGTATGTCATAATTGGTCAGATGAAAAATGTGTGAAACTTTTAAAAAATTGCTACAAAGCTTTGCCACAACATGGAAAGGTAATTATTCTGGACTGTATAATGCCAGAAACTCCGAATTCTAGCACTGCATCAAAGCATGCTTGCATTGCCGACAGTCTTATGTTTCTAACACATGGTGGAAAGGAAAGAACTGAGAAAGAATTGGAGAACTTATGCAGAAGCTCTGGATTTTCTAGATTTCATGTTGCTTGCAATGATTTCTCAGCTATGTCAGGAGTAATTGAATTTTATAAATAA 1101 0.3706 MSSNSKLNPLSTEVAKDEAYRYALLLSTIRVFPAFLNAAVDLNLFEIIAKSSSYGSNMSASEIASHMPNQHPELANRLERMLPLLASYSLLTCSIRTNEDGKNERVYSLSHVGEYFAYDKVGGSTAPLSTLLHRGFDAMWMNVKDAFEDADSNIYAEKVFGMPLYKHIETDKELSDIFMKAMAHVTPLEMKIILEIYKGFDGVSTLVDVGGGIGQALKGIISDYPSIKGINFDLPHVVQNAPPHQGIEHIGGDMFECVPEGDAIMLKEVCHNWSDEKCVKLLKNCYKALPQHGKVIILDCIMPETPNSSTASKHACIADSLMFLTHGGKERTEKELENLCRSSGFSRFHVACNDFSAMSGVIEFYK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3194g00017 366 PIRSF O-mtase 1 366 IPR016461 GO:0008168
Gabi3194g00017 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 357 IPR029063 -
Gabi3194g00017 366 Pfam O-methyltransferase domain 140 346 IPR001077 GO:0008171
Gabi3194g00017 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 366 IPR016461 GO:0008168
Gabi3194g00017 366 Gene3D Vaccinia Virus protein VP39 175 353 IPR029063 -
Gabi3194g00017 366 PANTHER O-METHYLTRANSFERASE 29 355 IPR016461 GO:0008168
Gabi3194g00017 366 FunFam Caffeic acid 3-O-methyltransferase 2 116 - -
Gabi3194g00017 366 Pfam Dimerisation domain 36 86 IPR012967 GO:0046983
Gabi3194g00017 366 SUPERFAMILY "Winged helix" DNA-binding domain 18 119 IPR036390 -
Gabi3194g00017 366 Gene3D - 31 193 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3194g00017 Gabi-Chr3194 331242 333234 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3194g00017 2 366 Monolignol Biosynthesis Gene Families AT5G54160 47.154 1.88e-110 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3194g00017 - - aprc:113869089 491.5