Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3194g00009 ATGGTGTCAAGATCCTATTCAAATCTATTAGACCTGGCCTCTGGTGAGGCTCCATCATTTGGGTATATGAACAGGAGAATTCCAAGGATTATGACTGTGGCTGGGTTGATATCTGATGTTGATGATGACCCAGAGGAGAGTGTGTGCTCTGATCCATCTTCTTCTACAGTGCACAGAGACAGGATCATAATAGTGGCTAATCAGCTCCCTATTAGGGCTCAGAGGAAGCCAGATGGTAATAGGAATTGGTCTTTTGAATGGGATGAGAATTCACTTCTTCAATTGAAAGATGGATTAGGGGATGATGATATTGAGGTTATTTATGTTGGATGTCTTAAGGAAGATGTTCATCTAAATGAACAGGATGAGGTTTCACAGATACTTCTTGAGAACTACAAGTGTGTCCCAACTTTTCTCCCACCTGATATGTTTACTAGGTACTATCATGGGTTTTGCAAACAACAGTTGTGGCCACTGTTTCATTACATGTTGCCTCTGTCACCAGAACTTGGTGGTAGGTTTAATAGGTCACTTTGGCAAGCTTATGTCTCAGTCAATAAAATTTTTGCAGATAGGATCATGGAAGTTATTAACCCTGAAGATGATTTTGTGTGGATACATGATTATCATCTGATGGTGTTACCAACTTTCTTAAGGAAGAGATTTAACAGAGTTAAACTGGGATTCTTCCTTCATAGCCCATTCCCTTCATCAGAAATATATAAGACATTGCCTGTTAGGGAAGAGCTCTTGAGACGTGGTTACATTGGGATAGAGTATTATGGTAGGACTGTTAGTATCAAAATTCTTCCTGTTGGTATACATATGGGTCAGCTTCAATCAGTTTTAAGACTGCCGAAGACTGAAGAAAAAGTTTGTGAGCTCATTAGACAGTTTTCTGATCGAGGAAGGACAATGTTGCTTGGGGTGGATGACATGGATATTTTTAAGGGTATAAGTTTGAAGCTATTGGCCATGGAGCAGCTTCTCATGCAGCACCCTGAGTATCAGGGAAAGGTAGTACTGGTCCAGATAGCTAATCCTGCGAGGGGACGGGGGAAGGATGTGAAAGAAGTGCAAGCTGAGACGAAGGCCACCGTAAAACGGATTAATGAATCATTTGGGAAACCCGGGTATGATCCTGTTATTCTGATTGAGGAGCCTCTCGAGTTTTATGAGAGGGTTGCATACTATGTTGTTGCGGAGTGTTGTTTGGTCACTGCAGTAAGGGATGGAATGAATCTCATACCATATGAATATATAATTAGTCGTCAAGGAAATGAAACATTGGATAAAGTTTTGGGGTTAGCTTCCTCCCCTAAGAAGAAAAGCATGTTAGTTGTGTCTGAGTTCATTGGCTGTTCTCCATCTTTAAGTGGAGCAATCAGAGTGAACCCGTGGAATGTGGATGCAGTAGCAGATGCAATGGACACTGCCTTGGAAATGGCTGATTCAGAGAAACAGCTTAGGCATGAAAAACATTATAGATATGTTAGTACTCATGATGTTGGTTACTGGGCCCGAAGCTTCTTACAAGATTTGGAAAGGACTTGTAGTGATCATGTACGGCGAAGGTGGTGGGGAATTGGGTTTGGATTAAGTTTTAGAGTTGTAGCACTTGATCCAAACTTCAGGAAGCTCTCAATGGAGCACATAGTTTCAGCTTACAAGCGGACAACAACTAGGGCAATTCTTCTAGACTATGATGGTACACTAATGCCTCAGGCTTCCATTGATAAGAGCCCAACCAGTAAATCCATTGAAATTCTTAGTAGTTTGTGTAGAGATAAGAACAACGTGGTGTTTCTTGTTAGTGCTAGAAGCCGAAAGACACTTAATGAATGGTTTTCTCCTTGTGAGAATCTCGGAATTGCAGCTGAGCATGGTTACTTTCTAAGAATGAAGCGAGATGAAGAATGGGAAACATGTGTTCCTGCGATAGACCATAGTTGGAAACAAATTGCAGAGCCGGTAATGAAACTTTATACTGAAACAACTGATGGATCCACCATTGAAGATAAGGAGACTGCACTTGTCTGGTGCTATGAGGATGCAGATCCAGATTTTGGATCATGCCAAGCTAAGGAACTTCTTGATCATCTGGAAAGTGTGCTTGCAAATGAACCAGTAACAGTCAAGAGTGGCCAGAATAATGTAGAGGTTAAACCACAGGGTGTGAGCAAGGGACTAGTGGCCAAACGCCTTCTTTCTGCAATGCAAGAAAAGGAAATGTCACCTGATTTTGTTTTGTGTATAGGAGATGACAGGTCTGATGAAGACATGTTTGAGGTAATCACAAGTTCAATGGCTGGTCCAATTGCTCCAAGGGCTGAAGTGTTTGCATGCACTGTTGGTCGAAAACCCAGTAAAGCTAAGTACTATCTTGATGATACAGCTGAAATAGTGAGATTGATTCAGGGTTTAGCCTGTGTTTCTGAACAAAGAGTTCTATGTTAA 2457 0.4147 MVSRSYSNLLDLASGEAPSFGYMNRRIPRIMTVAGLISDVDDDPEESVCSDPSSSTVHRDRIIIVANQLPIRAQRKPDGNRNWSFEWDENSLLQLKDGLGDDDIEVIYVGCLKEDVHLNEQDEVSQILLENYKCVPTFLPPDMFTRYYHGFCKQQLWPLFHYMLPLSPELGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPVREELLRRGYIGIEYYGRTVSIKILPVGIHMGQLQSVLRLPKTEEKVCELIRQFSDRGRTMLLGVDDMDIFKGISLKLLAMEQLLMQHPEYQGKVVLVQIANPARGRGKDVKEVQAETKATVKRINESFGKPGYDPVILIEEPLEFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNETLDKVLGLASSPKKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDTALEMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPTSKSIEILSSLCRDKNNVVFLVSARSRKTLNEWFSPCENLGIAAEHGYFLRMKRDEEWETCVPAIDHSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNNVEVKPQGVSKGLVAKRLLSAMQEKEMSPDFVLCIGDDRSDEDMFEVITSSMAGPIAPRAEVFACTVGRKPSKAKYYLDDTAEIVRLIQGLACVSEQRVLC 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3194g00009 818 FunFam Alpha,alpha-trehalose-phosphate synthase 282 499 - -
Gabi3194g00009 818 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 561 678 - -
Gabi3194g00009 818 FunFam Trehalose-6-phosphate synthase 10 692 817 - -
Gabi3194g00009 818 Pfam Glycosyltransferase family 20 257 515 IPR001830 GO:0003824|GO:0005992
Gabi3194g00009 818 Pfam Glycosyltransferase family 20 61 252 IPR001830 GO:0003824|GO:0005992
Gabi3194g00009 818 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 518 - -
Gabi3194g00009 818 Gene3D Glycogen Phosphorylase B; 50 255 - -
Gabi3194g00009 818 Gene3D Glycogen Phosphorylase B; 277 499 - -
Gabi3194g00009 818 Gene3D - 561 690 IPR023214 -
Gabi3194g00009 818 Gene3D - 691 817 IPR023214 -
Gabi3194g00009 818 NCBIfam HAD-IIB family hydrolase 564 765 IPR006379 -
Gabi3194g00009 818 CDD HAD_TPP 563 803 - -
Gabi3194g00009 818 Pfam Trehalose-phosphatase 565 798 IPR003337 GO:0003824|GO:0005992
Gabi3194g00009 818 SUPERFAMILY HAD-like 562 809 IPR036412 -
Gabi3194g00009 818 NCBIfam trehalose-phosphatase 561 808 IPR003337 GO:0003824|GO:0005992
Gabi3194g00009 818 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 253 809 IPR001830 GO:0003824|GO:0005992
Gabi3194g00009 818 CDD GT20_TPS 61 515 IPR001830 GO:0003824|GO:0005992
Gabi3194g00009 818 FunFam Trehalose-6-phosphate synthase 8 56 253 - -
Gabi3194g00009 818 FunFam Trehalose-6-phosphate synthase 2 645 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3194g00009 Gabi-Chr3194 130157 134118 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3194g00009 1 814 Trehalose Biosynthesis Gene Families AT1G68020 77.752 0.0 1381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3194g00009 K16055 - gmx:100818822 1513.82