Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3194g00008 ATGGTGTCAAGATCCTATTCAAATCTATTAGACCTGGCCTCTGGTGAGGCTCCATCATTTGGGTATATGAACAGGAGAATTCCAAGGATTATGACTGTGGCTGGGTTGATATCTGATGTTGATGATGACCCAGAGGAGAGTGTGTGCTCTGATCCATCTTCTTCTACAGTGCACAGAGACAGGATCATAATAGTGGCTAATCAGCTCCCTATTAGGGCTCAGAGGAAGCCAGATGGTAATAGGAATTGGTCTTTTGAATGGGATGAGAATTCACTTCTTCAATTGAAAGATGGATTAGGGGATGATGATATTGAGGTTATTTATGTTGGATGTCTTAAGGAAGATGTTCATCTAAATGAACAGGATGAGGTTTCACAGATACTTCTTGAGAACTACAAGTGTGTCCCAACTTTTCTCCCACCTGATATGTTTACTAGGTACTATCATGGGTTTTGCAAACAACAGTTGTGGCCACTGTTTCATTACATGTTGCCTCTGTCACCAGAACTTGGTGGTAGGTTTAATAGGTCACTTTGGCAAGCTTATGTCTCAGTCAATAAAATTTTTGCAGATAGGATCATGGAAGTTATTAACCCTGAAGATGATTTTGTGTGGATACATGATTATCATCTGATGGTGTTACCAACTTTCTTAAGGAAGAGATTTAACAGAGTTAAACTGGGATTCTTCCTTCATAGCCCATTCCCTTCATCAGAAATATATAAGACATTGCCTGTTAGGGAAGAGCTCTTGAGAGCCCTCCTTAATTCGGATTTGATTGGGTTCCACACTTTTGATTATGCGCGACATTTCCTCTCCTGTTGTAGTCGGATGCTCGGTCTTACCTACGAATCGAAGCGTGGTTACATTGGGATAGAGTATTATGGTAGGACTGTTAGTATCAAAATTCTTCCTGTTGGTATACATATGGGTCAGCTTCAATCAGTTTTAAGACTGCCGAAGACTGAAGAAAAAGTTTGTGAGCTCATTAGACAGTTTTCTGATCGAGGAAGGACAATGTTGCTTGGGGTGGATGACATGGATATTTTTAAGGGTATAAGTTTGAAGCTATTGGCCATGGAGCAGCTTCTCATGCAGCACCCTGAGTATCAGGGAAAGGTAGTACTGGTCCAGATAGCTAATCCTGCGAGGGGACGGGGGAAGGATGTGAAAGAAGTGCAAGCTGAGACGAAGGCCACCGTAAAACGGATTAATGAATCATTTGGGAAACCCGGGTATGATCCTGTTATTCTGATTGAGGAGCCTCTCGAGTTTTATGAGAGGGTTGCATACTATGTTGTTGCGGAGTGTTGTTTGGTCACTGCAGTAAGGGATGGAATGAATCTCATACCATATGAATATATAATTAGTCGTCAAGGAAATGAAACATTGGATAAAGTTTTGGGGTTAGCTTCCTCCCCTAAGAAGAAAAGCATGTTAGTTGTGTCTGAGTTCATTGGCTGTTCTCCATCTTTAAGTGGAGCAATCAGAGTGAACCCGTGGAATGTGGATGCAGTAGCAGATGCAATGGACACTGCCTTGGAAATGGCTGATTCAGAGAAACAGCTTAGGCATGAAAAACATTATAGATATGTTAGTACTCATGATGTTGGTTACTGGGCCCGAAGCTTCTTACAAGATTTGGAAAGGACTTGTAGTGATCATGTACGGCGAAGGTGGTGGGGAATTGGGTTTGGATTAAGTTTTAGAGTTGTAGCACTTGATCCAAACTTCAGGAAGCTCTCAATGGAGCACATAGTTTCAGCTTACAAGCGGACAACAACTAGGGCAATTCTTCTAGACTATGATGGTACACTAATGCCTCAGGCTTCCATTGATAAGAGCCCAACCAGTAAATCCATTGAAATTCTTAGTAGTTTGTGTAGAGATAAGAACAACGTGGTGTTTCTTGTTAGTGCTAGAAGCCGAAAGACACTTAATGAATGGTTTTCTCCTTGTGAGAATCTCGGAATTGCAGCTGAGCATGGTTACTTTCTAAGAATGAAGCGAGATGAAGAATGGGAAACATGTGTTCCTGCGATAGACCATAGTTGGAAACAAATTGCAGAGCCGGTAATGAAACTTTATACTGAAACAACTGATGGATCCACCATTGAAGATAAGGAGACTGCACTTGTCTGGTGCTATGAGGATGCAGATCCAGATTTTGGATCATGCCAAGCTAAGGAACTTCTTGATCATCTGGAAAGTGTGCTTGCAAATGAACCAGTAACAGTCAAGAGTGGCCAGAATAATGTAGAGGTTAAACCACAGGGTGTGAGCAAGGGACTAGTGGCCAAACGCCTTCTTTCTGCAATGCAAGAAAAGGAAATGTCACCTGATTTTGTTTTGTGTATAGGAGATGACAGGTCTGATGAAGACATGTTTGAGGTAATCACAAGTTCAATGGCTGGTCCAATTGCTCCAAGGGCTGAAGTGTTTGCATGCACTGTTGGTCGAAAACCCAGTAAAGCTAAGTACTATCTTGATGATACAGCTGAAATAGTGAGATTGATTCAGGGTTTAGCCTGTGTTTCTGAACAAAGAGTTCTATGTTAA 2559 0.417 MVSRSYSNLLDLASGEAPSFGYMNRRIPRIMTVAGLISDVDDDPEESVCSDPSSSTVHRDRIIIVANQLPIRAQRKPDGNRNWSFEWDENSLLQLKDGLGDDDIEVIYVGCLKEDVHLNEQDEVSQILLENYKCVPTFLPPDMFTRYYHGFCKQQLWPLFHYMLPLSPELGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPVREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGIEYYGRTVSIKILPVGIHMGQLQSVLRLPKTEEKVCELIRQFSDRGRTMLLGVDDMDIFKGISLKLLAMEQLLMQHPEYQGKVVLVQIANPARGRGKDVKEVQAETKATVKRINESFGKPGYDPVILIEEPLEFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNETLDKVLGLASSPKKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDTALEMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPTSKSIEILSSLCRDKNNVVFLVSARSRKTLNEWFSPCENLGIAAEHGYFLRMKRDEEWETCVPAIDHSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNNVEVKPQGVSKGLVAKRLLSAMQEKEMSPDFVLCIGDDRSDEDMFEVITSSMAGPIAPRAEVFACTVGRKPSKAKYYLDDTAEIVRLIQGLACVSEQRVLC 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3194g00008 852 Gene3D Glycogen Phosphorylase B; 315 533 - -
Gabi3194g00008 852 CDD GT20_TPS 61 549 IPR001830 GO:0003824|GO:0005992
Gabi3194g00008 852 NCBIfam trehalose-phosphatase 595 842 IPR003337 GO:0003824|GO:0005992
Gabi3194g00008 852 Gene3D - 724 851 IPR023214 -
Gabi3194g00008 852 Gene3D - 595 723 IPR023214 -
Gabi3194g00008 852 Pfam Glycosyltransferase family 20 61 549 IPR001830 GO:0003824|GO:0005992
Gabi3194g00008 852 FunFam Trehalose-6-phosphate synthase 2 679 758 - -
Gabi3194g00008 852 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 552 - -
Gabi3194g00008 852 CDD HAD_TPP 597 837 - -
Gabi3194g00008 852 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 595 712 - -
Gabi3194g00008 852 Gene3D Glycogen Phosphorylase B; 53 314 - -
Gabi3194g00008 852 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 314 - -
Gabi3194g00008 852 FunFam Alpha,alpha-trehalose-phosphate synthase 316 533 - -
Gabi3194g00008 852 Pfam Trehalose-phosphatase 599 832 IPR003337 GO:0003824|GO:0005992
Gabi3194g00008 852 NCBIfam HAD-IIB family hydrolase 598 799 IPR006379 -
Gabi3194g00008 852 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 843 IPR001830 GO:0003824|GO:0005992
Gabi3194g00008 852 FunFam Trehalose-6-phosphate synthase 10 726 851 - -
Gabi3194g00008 852 SUPERFAMILY HAD-like 596 843 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3194g00008 Gabi-Chr3194 130157 134118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3194g00008 1 848 Trehalose Biosynthesis Gene Families AT1G68020 81.692 0.0 1470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3194g00008 K16055 - gmx:100818822 1601.65