Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3194g00005 ATGACAATCAGATCGAGAAGATCGAAGCGGAAGCTCCATCCGGAACAGGAACCAGAACCACCACTGCACATCATTAGCAAGAAGCTCCGGTCGAAGCTACCTCGCCGGCGAAGATGCCAGATCTCGCCGGTGCTTATTCCGTCCATGAGGTTCAGCATTTCTGGCGTGAATCCTCGTTTCTCCGTTGTTTCAGTGGATTCGAGTTCTGGCTCGGACTTCGTCGGCGGTGAAGTTTCGTGCGATTCGAACAGAGCTTCCACTGCACTCTCTGGCTTAGGAAGGTCGAAATCGAAAAACAGATTATCATCCGAAATTGAAGGCGTTAGGAATGGTGATTGTGTTGATTTCTTGAGAAATCGGAGATTCGTAAAGCGGAATGAAAATGAAGTGGAGGTGTCACAGTCTTCGTGTGTGGACTCCAATTCTAGTGTTCGTGAACGTAGCAGAAGCTTGGTTTTGAAGTTCAGGAGCGGAAAAGAAAGTAAGAATTTGAAAGAAAATGATGAAGTTTCGGAAGCTTGCACGAAATCGGAGATTACTTGCGAGGAGCAACTTCACGTTGAGACTTCAAAGTCCGGTAACGGAAATTTGAAAATCTCGTCGGAGATAAACCGAAACGACGTCGTTTCAGTTAGCTCTGGTGTTCGTGCGACTTCGTTTGAGGAGGAAAAGACCAAATGTAAGGAAAACAGAGCATCGCAATTGGAATTCTCTCCAGGTTCAAGAAAAAATTACGCTGGTGAGAATTGCGCTGATTTGATGGCGCAATCGATAATAAAGCAGGGATGGAACAATTCAGGCGTCGACTCCGATCTCAATTGCTCAGAGCAATTGAGATTCTCATGCTCTGAAGACGAATCAGAGTACTGTTCCAGCCAGGGAACTGCATTCTCTGACCTTCATTCCGAGATCTTCGGCGAATGCTCAGAACTAGAGCATTCAGATTACACTCCGTCTCTGTTCACCGATTCTGGAAGCCAGTTTTCGCAGGGATCCGTTGGAGAAACTCCTTCGCCAACTTATTCGCTGTTCCTTCAGTACCGCGAGCAATTCTCGACGCTAACTTCTCCAGTTATTGCTTCAAGCGTCGACTCTCTTCCACTCAAATTTGCGAGGTTGGAAGATTTGGATGACGAAGACAGCTACCAGATGCTGAGAAAGAGGGAAAGGAGGCAAGTTTTCCTGTGGAATTATGCTGAAAGATATTTCTCTACCACGGATATAGGAGAGCTCGTGCTTCAGCAACGTTCCCAAATGGTTCACTGGATCGTTGAGCAATGTAATCGAAAACAGCTTCTGCAAGAGACAATGTTTCTTGGAGTCAGCCTACTTGACCGTTTCTTAAGCAAAGGATACTTCAAAGCCAAAAGGAACCTTCAAATTGTTGGAATAGCCTGCCTTACGTTAGCCACCAGGATCGAAGAAAACCAGCAATATAACAGAGTGGGGCAAAAAAATTTCTACATAAAAAGCAATGTGTACAGTAGATGCGAGGTTGTGGCTATGGAATGGATGGTGCAGGAGGTGCTCAACTTCCAGTGTTTTCTGCCTACCATCTACAGTTTCTTGTGGTTCTACCTAAAAGCTGCTAATGCTGATGCAGTTGTGGAGAAGAGGGTCAAGTATCTGGCAGTGCTTGCACTGTCAGCTCATGATCAGCTGTGCTACTGGCCCTCAACAGTTGCTGCGGCACTTGTAATCCTGGCTTGTTTAGAAGTCAATCAACATGCAATCCACAAAGTCATAGGGATCCACGTTAGATCAAAGGATGAGAATTTGCATGAATGCATGGAGAGCCTGGAGTGGTTGTTACGCTATCTATGA 1824 0.4589 MTIRSRRSKRKLHPEQEPEPPLHIISKKLRSKLPRRRRCQISPVLIPSMRFSISGVNPRFSVVSVDSSSGSDFVGGEVSCDSNRASTALSGLGRSKSKNRLSSEIEGVRNGDCVDFLRNRRFVKRNENEVEVSQSSCVDSNSSVRERSRSLVLKFRSGKESKNLKENDEVSEACTKSEITCEEQLHVETSKSGNGNLKISSEINRNDVVSVSSGVRATSFEEEKTKCKENRASQLEFSPGSRKNYAGENCADLMAQSIIKQGWNNSGVDSDLNCSEQLRFSCSEDESEYCSSQGTAFSDLHSEIFGECSELEHSDYTPSLFTDSGSQFSQGSVGETPSPTYSLFLQYREQFSTLTSPVIASSVDSLPLKFARLEDLDDEDSYQMLRKRERRQVFLWNYAERYFSTTDIGELVLQQRSQMVHWIVEQCNRKQLLQETMFLGVSLLDRFLSKGYFKAKRNLQIVGIACLTLATRIEENQQYNRVGQKNFYIKSNVYSRCEVVAMEWMVQEVLNFQCFLPTIYSFLWFYLKAANADAVVEKRVKYLAVLALSAHDQLCYWPSTVAAALVILACLEVNQHAIHKVIGIHVRSKDENLHECMESLEWLLRYL 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3194g00005 607 MobiDBLite consensus disorder prediction 1 21 - -
Gabi3194g00005 607 Gene3D - 509 606 - -
Gabi3194g00005 607 Pfam Cyclin, C-terminal domain 517 601 IPR004367 -
Gabi3194g00005 607 SUPERFAMILY Cyclin-like 517 604 IPR036915 -
Gabi3194g00005 607 CDD CYCLIN_SDS-like_rpt2 517 604 - -
Gabi3194g00005 607 Gene3D - 402 508 - -
Gabi3194g00005 607 Pfam Cyclin, N-terminal domain 410 513 IPR006671 -
Gabi3194g00005 607 SUPERFAMILY Cyclin-like 376 513 IPR036915 -
Gabi3194g00005 607 ProSitePatterns Cyclins signature. 416 447 IPR006671 -
Gabi3194g00005 607 PANTHER CYCLINS 327 600 IPR039361 -
Gabi3194g00005 607 SMART cyclin_7 421 508 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3194g00005 Gabi-Chr3194 103937 109624 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3194g00005 380 575 Core Cell Cycle Gene Families AT5G11300 33.663 8.72e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3194g00005 K21777 - gmx:100817658 711.449