Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3194g00003 ATGGTTCTCTGCATCACCTTCCCCTTCTTCACCTTGTTGTTCCTCTTCAACCTTCAGCCCTCAATTGCTCAACAACAACGTCAACAACAACAACAACAACTCACATCCTTCAACATCTCATTCTCTCCATGGCTTCCAACACAGAACAAAGTCCTTCTTTCCCCAAACTCAAACTTCACTGCAGGTTTCTTTCCCATACCCAATTCTCAAAACCTCTTCACTTTCTCTGTTTGGTTCTCCAAAGTCCCTCAAAGTGCAAACCCTGTTATCTGGAACGCCACAACCCAAGTCAACAACTCTGGCTCCCTTGTAATCACCACAAAAGGTGAGCTTCTTCTCAATGATTCACCCTTTGCTAATAATGCTTCTTCTTCTTCCAATTCCACACAACTTGTTCTTGACAACGATGGAAACTTGGTCTTTGGGGATTGGAGCAGCTTCAAGAATCCAACCAACACCATCTTGCCTAACCAAAACTTCAGTGGGATTGAGCTTTATACCATTAATGGGAAATACAAGTTCATAAAGTCTCAGTTTTTGGTTCTCAATTCCACATCTGATCAATACTACAATACCCCAAGTCCCTTGGTGAGCATGGATGATGCTGGGAAAATGACCATGGTAGGTGGCTTTTTTCTTACCTCAGATTATGGTGACCCCAGGTTGAGAAAAATGGTTCTTGATGAGGATGGGAATCTCAAAATCTATAGCTTCTACCCCGAGCAACAAAACAAGTGGGTTGAGGTATGGAAAGCAGTATGGGAGGTGTGCACAATCAAAGGAAAATGTGGATCTAATGCTATATGCATGCCAAAAGAGAATTTGAATTACACTTCTACTTACTGTGTTTGTCCATCAGGTTTCAAGGCAAATCAAGGTGGCCCTGAAAATGGTTGCACAAGGAAAATCCCACTTTCAAGTAACACCAAATTTCTCAGGCTAGATTACATAAACTACACCAGCAACAGCCAGATGAATCAAATCGTTGCTAACAACTTCACAATCTGTGAATCAGGATGCATAAGAGACACAAGGTGTCTTGGGTTTGGCTTCAAATATGATGGAACAGGCTATTGTGTTTGGCTATTAGGAACAGAACTTCAATATGGTTATTGGTCACCAGGCCCTGAAATTGCTTTGTTTCTTAAAGTTGACAAATCTGAATCAGAAGCCACAAATTTCATTGGCATGACTGAGGTGATGCAAACAGCATGTCCTGTCAAAATAAGCCTGCCACTACCACCAAAGGACTCAAACACAACCACAAGAAACATTGCCATAATTTGCACCCTTTTTGCTTTAGAATTCATATCTGGGGTGGCTTTCTTTTGGTCATTCCTCAAGAGGTACATAAAGTATAGGGACATGGCCACAACACTAGGCCTTGAGCTCTTACCTGCTGGTGGCCCCAAAAGGTTCACATACTCAGAACTCAAAGCTGCCACAAATGACTTCTCCAACCTCATAGGGAGAGGTGGCTTTGGAGATGTTTACAAAGGGGAGCTGCCGGACCACCGTGTCGTCGCCGTGAAGTGCCTGAAGAATGTCGCCGGCGGTGATGCTGAGTTTTGGGCAGAGGTCACTATCATTGCAAGGATGCACCACCTCAACTTGGTTCGCTTGTGGGGTTTCTGTGCTGAGAAAGGTCAAAGGATACTTGTCTATGAGCATATCCCTGGTGGTTCATTGGACAAGCACTTGTTCCAAGTCAAAAAGTCTCTCAAGGGTGGTGAATTTGACCCAAACAACAACAACAATAACAGACAAGATAAACCTGTTCTGGATTGGAACATGAGGTACAGGATTGCTCTTGGTGTGGCTAGAGCTATTGCATACTTGCATGAGGAGTGTTTGGAATGGGTTTTGCACTGTGACATTAAGCCTGAGAACATACTCTTAGGTGATGATTTTTGTCCCAAGATATCAGATTTTGGGTTGGCCAAACTAAGGAAAAAGGAGGATATGGTAACCATGTCTAGGAAAAGGGGTACTCCTGGTTATATGGCTCCAGAATGGATCACTGCAGATCCAATCACCTCCAAAGCTGATGTGTATAGCTTTGGCATGGTGCTGTTGGAGCTTGTGAGTGGGGTCAGGAACTTTGAGATTCAAGGGTCTGTGGTCCATAGTGAGGAGTGGTATTTCCCAAGATGGGCTTTTGATAAGATGTTCAAGGATATGAGAGTGGAAGATATTCTGGATATTCAGATTAAGGATGTTTATGATTCAAGGGCCCATTTTGAATTGGTTAATAGAATGGTGAAGACAGCAATGTGGTGCCTTCAGGATAGACCTGAGTTGAGGCCTACAATGGGGAAGGTTGCTAAGATGTTGGAAGGGACTGTGGAGATCACTGAACCAAAGAAGCCCACTATTTTCTTCCTTGGGGAAGAGTAG 2397 0.4351 MVLCITFPFFTLLFLFNLQPSIAQQQRQQQQQQLTSFNISFSPWLPTQNKVLLSPNSNFTAGFFPIPNSQNLFTFSVWFSKVPQSANPVIWNATTQVNNSGSLVITTKGELLLNDSPFANNASSSSNSTQLVLDNDGNLVFGDWSSFKNPTNTILPNQNFSGIELYTINGKYKFIKSQFLVLNSTSDQYYNTPSPLVSMDDAGKMTMVGGFFLTSDYGDPRLRKMVLDEDGNLKIYSFYPEQQNKWVEVWKAVWEVCTIKGKCGSNAICMPKENLNYTSTYCVCPSGFKANQGGPENGCTRKIPLSSNTKFLRLDYINYTSNSQMNQIVANNFTICESGCIRDTRCLGFGFKYDGTGYCVWLLGTELQYGYWSPGPEIALFLKVDKSESEATNFIGMTEVMQTACPVKISLPLPPKDSNTTTRNIAIICTLFALEFISGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFTYSELKAATNDFSNLIGRGGFGDVYKGELPDHRVVAVKCLKNVAGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGQRILVYEHIPGGSLDKHLFQVKKSLKGGEFDPNNNNNNRQDKPVLDWNMRYRIALGVARAIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDMVTMSRKRGTPGYMAPEWITADPITSKADVYSFGMVLLELVSGVRNFEIQGSVVHSEEWYFPRWAFDKMFKDMRVEDILDIQIKDVYDSRAHFELVNRMVKTAMWCLQDRPELRPTMGKVAKMLEGTVEITEPKKPTIFFLGEE 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3194g00003 798 ProSiteProfiles Protein kinase domain profile. 483 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3194g00003 798 PANTHER OS07G0415500 PROTEIN 9 793 - -
Gabi3194g00003 798 ProSiteProfiles Bulb-type lectin domain profile. 37 154 IPR001480 -
Gabi3194g00003 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 163 IPR036426 -
Gabi3194g00003 798 Pfam S-locus glycoprotein domain 220 291 IPR000858 GO:0048544
Gabi3194g00003 798 Gene3D - 44 153 IPR036426 -
Gabi3194g00003 798 ProSitePatterns Protein kinases ATP-binding region signature. 489 511 IPR017441 GO:0005524
Gabi3194g00003 798 Gene3D Phosphorylase Kinase; domain 1 457 557 - -
Gabi3194g00003 798 SMART blect_4 47 150 IPR001480 -
Gabi3194g00003 798 FunFam Serine/threonine-protein kinase 558 789 - -
Gabi3194g00003 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Gabi3194g00003 798 Gene3D Transferase(Phosphotransferase) domain 1 559 790 - -
Gabi3194g00003 798 SUPERFAMILY Protein kinase-like (PK-like) 466 779 IPR011009 -
Gabi3194g00003 798 Pfam Protein kinase domain 487 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3194g00003 798 CDD STKc_IRAK 489 780 - -
Gabi3194g00003 798 PIRSF SRK 166 798 IPR024171 GO:0004674
Gabi3194g00003 798 PIRSF SRK 2 195 IPR024171 GO:0004674
Gabi3194g00003 798 SMART serkin_6 483 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3194g00003 798 FunFam S-receptor-like serine/threonine-protein kinase 455 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3194g00003 Gabi-Chr3194 47562 50155 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3194g00003 471 792 Receptor kinase-like Gene Family AT4G18250 39.514 4.09e-75 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gabi3194g00003 Pkinase 6.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3194g00003 - - gmx:100775518 1309.66