Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3193g00001 ATGGATCATCCAATCCTTCACTTATTAGCCATTATCCTCTTTATCCTCTTCTTATTTGTGGCACTAAAAATTGGGAGGAATCTCAAGAAAAGTGACTCAACTCCAAATATACCTCCTGGGCCATGGAAGCTACCAATTATAGGACATATACCCCATCTTGTTACATCTACACCACATCGAAAAATAAAAAATTTGGCCAATATTTATGGACCCTTGATGCATTTACAACTTGGAGAGGTCTTCACAATCGTTGTTTCCTCACCAGAGTATGCTAGGGAGGTAATGAAAACTCATGATGTCATCTTTGCATCAAGGCCTCCTATTCTAGCTACAGAAATATTGTCTTACGAATCCACAAATATTGGTTTTTCACCTTACGGAAATTATTGGAGACAACTAAGAAAAATATGCACACTGGAACTTTTCACCCAAAAGCGTGTCAGTTCATTCCAGCCAATAAGAGAAGAAGAGCTAACCAATCTTATCAAAAGGATTGATTCACAGAAAGGATCACCCGTCAACATTACACAAGCAGTAACTTCATCAATATTTACTATCACTTCAAGGGCTGCATTTGGCAAGAAATGCAAAGACCAAGAAGAATTCATATCAGCGGCCAAAGAAACAATAACAGTCGCAGGAGGTTTTGACATAGGAGATATGTTTCCTTCTGCTAAATGGCTTCAACACGTTACTGGTTTGAGGCCTAAGCTTGAGAGGTTGCATCGGAAAGTTGATCAAATATTGGAAAACATCATCACTGAACATAAAGAGAAGTCAAAACCCAAAGAAGGCAAAGATGATGCAGAGGAAGATCTGATAGATGTTCTCTTAAAATTTCAGGATGGTAATGGCAGCAACCAGGATATTTGCTTAACTAATAACAATATAAAGGCTATAACCCTGGATATCTTTGTTGCTGGAGGTGAGACAGCAGCAACTACCATAGATTGGGCAATGGCAGAGATGGTCAAGGATCCAAGAGTAATGAAGAAAGCGCAACATGAGGTGAGAGAAGTATTCAATATGAAAGGAATGGTTGATGAAATTTGCATCAATGAACTCAAATATTTGAAATTTGTTGTCAAAGAGGCCTTGAGGTTACACCCTCCAGTTCCTCTTTTACTTCCAAGAGAATGTGGGCAAGCATGTGAGATTAATGGGTATCACATACCAGCCAAAAGTCGGGTCATTGTCAATGCTTGGGCAATTGGAAGAGATCCAAAGTACTGGATTGAACCAGAGAGGTTTTATCCAGAGAGATTCATGAATAGCTCTATAAATTATAAAGGAAGTAATTTTGAGTACATTCCTTTTGGAGCTGGAAGAAGAATATGCCCAGGTAGCACACTGGGTTTAATAAATGTTGAGTTGGCCCTTGCATTGTTGTTGTATCACTTTGATTGGAAAATTCCTAATGGAATGAAGAGTGAGGACTTGGATATGACTGAGCAATTTGGAGTGGCTGTTAGAAGAAAATATGACCTGTACTTGATACCCACCTCACCCTTACCAAGTGTTTAA 1524 0.3891 MDHPILHLLAIILFILFLFVALKIGRNLKKSDSTPNIPPGPWKLPIIGHIPHLVTSTPHRKIKNLANIYGPLMHLQLGEVFTIVVSSPEYAREVMKTHDVIFASRPPILATEILSYESTNIGFSPYGNYWRQLRKICTLELFTQKRVSSFQPIREEELTNLIKRIDSQKGSPVNITQAVTSSIFTITSRAAFGKKCKDQEEFISAAKETITVAGGFDIGDMFPSAKWLQHVTGLRPKLERLHRKVDQILENIITEHKEKSKPKEGKDDAEEDLIDVLLKFQDGNGSNQDICLTNNNIKAITLDIFVAGGETAATTIDWAMAEMVKDPRVMKKAQHEVREVFNMKGMVDEICINELKYLKFVVKEALRLHPPVPLLLPRECGQACEINGYHIPAKSRVIVNAWAIGRDPKYWIEPERFYPERFMNSSINYKGSNFEYIPFGAGRRICPGSTLGLINVELALALLLYHFDWKIPNGMKSEDLDMTEQFGVAVRRKYDLYLIPTSPLPSV 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3193g00001 507 Pfam Cytochrome P450 38 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3193g00001 507 Gene3D Cytochrome P450 30 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3193g00001 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Gabi3193g00001 507 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3193g00001 507 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3193g00001 507 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3193g00001 507 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3193g00001 507 FunFam Cytochrome P450 71D8 30 500 - -
Gabi3193g00001 507 SUPERFAMILY Cytochrome P450 38 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3193g00001 507 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3193g00001 507 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3193g00001 507 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3193g00001 507 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3193g00001 507 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3193g00001 507 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3193g00001 507 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3193g00001 507 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3193g00001 507 CDD CYP71-like 69 496 - -
Gabi3193g00001 507 PANTHER OS08G0105600 PROTEIN 61 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3193g00001 Gabi-Chr3193 28413 35316 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3193g00001 9 501 Cytochrome P450 AT3G26300 41.200 7.61e-136 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3193g00001 - - gmx:102665189 786.563