Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3184g00019 ATGAGGAAGAAAAGGAAAGGAAGTGATAACGATGCATCTGCGGATCTGCCTGTTATTTTGCCTTCCAATCATGGCTCTGCATCGTCGAATTTCAAATCACATTACTCGCTGGAAGATTGTTCTAGGCTGAAGAAGAGGTGTAAAGAAGATGCTGACACTGAGCCAGCTGGTTCCTTTAAAAGTAGGCTTGCCGGCATTGCTACTGCTCCACCTTGTGGGACATCGTCTTTGATCACTTCCGGAAGAGGTCTCAAGAGGAAGATAGGTTGCATCGATGTTGCTACCCAGACGGGCAGGAAGAAGAAAATTGAGGATGATTATGTTTCTGGTGAAACCATTGGGCAAGGAAAATTTGGATCTGTTTGGCTGTGTCGGTCCAGGGTTAGCGGAGCAGAATGTGCTTGTAAGACTCTGAGGAAGGGGGAGGAGACGGTTCATCGAGAGGTTGAGATAATGCAGCACTTGTCTGGACATTCTGGGGTTGTGACACTGCAAGCAGTGTATGAAGAAGCTGAATGCTTTCATCTGGTGATGGAACTGTGCTCTGGTGGGCGACTAATTGATCAAATGGTTAAGGATGGTCCATATTCAGAACAGAGGGCTGCTAATATACTCAAGGAAGTGATGTTAGTCATCAAGTATTGTCATGACATGGGAGTTGTGCACAGAGATATCAAACCTGAAAATATTCTGCTCACAGCATCAGGGAAAATAAAGCTTGCAGATTTTGGCCTGGCCATGAGAATTTCAGAAGGTCAGAACTTGACTGGTTTGGCTGGAAGCCCTGCATATGTTGCCCCAGAAGTATTGTTGGGCCAATACTCTGAGAAGGTGGATATATGGAGTGCTGGAGTGCTCCTGCATGCTCTTTTGGTTGGCGGTCTTCCATTTCAAGGAAATTCATTGGAGGCAGTTTTTGAGGCTATTAAGTCCGTCGAAGTAGATTTTCAAACAGGGATGTGGGAATCAATATCTAAACCTGCCCGAGATCTTATTGGGAGAATGCTGACAAGGGATATTTCTGCAAGGATATCAGCTGACGAAGTACTTAGGCATCCATGGATATTGTTCTACACAGCGAATACATTAACAATGCTGCCCATCAAAACAAAATCGAAGCACCAAATTGGTGCTGCATGCCGACAGTTTGTGGCTGCATCTGAACCTAGGTTAGGAGTAAACAGGATAGATAATGGCTCACTTAGCGGGGTTTCATCCTCTGAGAGTTGCAATTCAGATGATCAGGATGAATGTGTGTTGATTGATGCGCTTGCGACTGCAATTTCACATGTGACGATATCCGAACCAAAGAGGAGCAGATTGTGTGTTCCCACAGGTCCAATAGTTCAGCAAGGTTCATCTAACATGAAGTCTAACAACCTTTGTAAAGCATTTTGA 1398 0.4485 MRKKRKGSDNDASADLPVILPSNHGSASSNFKSHYSLEDCSRLKKRCKEDADTEPAGSFKSRLAGIATAPPCGTSSLITSGRGLKRKIGCIDVATQTGRKKKIEDDYVSGETIGQGKFGSVWLCRSRVSGAECACKTLRKGEETVHREVEIMQHLSGHSGVVTLQAVYEEAECFHLVMELCSGGRLIDQMVKDGPYSEQRAANILKEVMLVIKYCHDMGVVHRDIKPENILLTASGKIKLADFGLAMRISEGQNLTGLAGSPAYVAPEVLLGQYSEKVDIWSAGVLLHALLVGGLPFQGNSLEAVFEAIKSVEVDFQTGMWESISKPARDLIGRMLTRDISARISADEVLRHPWILFYTANTLTMLPIKTKSKHQIGAACRQFVAASEPRLGVNRIDNGSLSGVSSSESCNSDDQDECVLIDALATAISHVTISEPKRSRLCVPTGPIVQQGSSNMKSNNLCKAF 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3184g00019 465 ProSiteProfiles Protein kinase domain profile. 107 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3184g00019 465 CDD STKc_CAMK 106 354 - -
Gabi3184g00019 465 SMART serkin_6 107 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3184g00019 465 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Gabi3184g00019 465 FunFam Serine/threonine-protein kinase PEPKR2 98 420 - -
Gabi3184g00019 465 MobiDBLite consensus disorder prediction 1 32 - -
Gabi3184g00019 465 PANTHER SERINE/THREONINE-PROTEIN KINASE 94 383 - -
Gabi3184g00019 465 SUPERFAMILY Protein kinase-like (PK-like) 99 380 IPR011009 -
Gabi3184g00019 465 Pfam Protein kinase domain 107 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3184g00019 465 Gene3D Transferase(Phosphotransferase) domain 1 98 392 - -
Gabi3184g00019 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3184g00019 Gabi-Chr3184 222966 226326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3184g00019 99 355 EF-hand Containing Proteins AT4G35310 43.446 3.66e-76 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gabi3184g00019 Pkinase 5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3184g00019 - - gmx:100812729 811.601