Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3181g00002 ATGTCGCGCCAGTCGACTTCGTCTGCTTTCACTAAATCGAAGACCCTCGACAATAAATATATGCTGGGAGATGAGATTGGGAAAGGAGCTTATGGTCGAGTTTACAAAGGTTTGGACCTGGAGAATGGAGATTTTGTTGCAATTAAACAAGTTTCTTTGGAGAATATTGCTCAGGAGGATCTCAACATCATTATGCAAGAGATTGATTTGTTAAAGAATTTGAACCACAAAAACATTGTAAAGTATCTCGGATCCTTAAAGACAAGGAGTCACCTGCACATAATTCTTGAGTATGTGGAGAATGGTTCACTTGCAAATATCATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCATTGGTTGCGGTTTATATTGCCCAGGTGTTGGAAGGCTTGGTTTATTTACATGAACAGGGTGTTATCCATCGAGATATTAAGGGTGCAAACATATTGACAACTAAAGAGGGTCTTGTCAAACTTGCTGATTTTGGTGTTGCAACAAAATTAACAGAGGCTGATGTTAATACTCATTCAGTTGTTGGAACACCATACTGGATGGCCCCAGAGGTTATAGAAATGTCTGGGGTTTGTGCTGCTTCTGACATTTGGAGTGTTGGCTGTACGGTTATTGAACTTCTTACATGTGTACCTCCTTATTATGATTTGCAGCCTATGCCGGCTCTTTTCCGTATTGTCCAGGATGAACATCCTCCAATTCCTGATAGCCTGTCACCTGACATTACTGATTTTCTGCATCAATGCTTTAAGAAGGATGCTAGACAAAGGCCTGATGCTAAAACGCTGCTATCTCACCCCTGGATTCAAAATTGTAGACGTGCCCTGCAGTCTTCTCTCCGTCATAGTGGAACATTAAGAAATATAGAAGATGATGATTCTGGAGATGCAGAAGTTCCTGGTGGTGATCATAAGAGTGCTGGTGAAAACTCTTCTGTTGAGAAAGAGGACTCTGCAAAAGAGTTTTCAAGTGTGGCTGCTGATAGCAGCAAAACTCATGAAGACAATGCTTCAGATTCTAATTTTCTTAACGAAAGAACAGAGAAGGCAGATGATGTTCCATCAGATCAAGTTCTTACGTTAGCCATTCGAGAGAAGTCATTTATACAAACTGGTTCTAGCAGACTCTCTTCTAATAGAGAAGTGGTTAGTTCTGAGCCAACTAGCAATCATGAGGTTTCAAGTTCTAAAGAATTTCATGAAGTCATGATGAATGGAGATGTCGGATCTCCACAATCAAGTGGAATGGCCAATAAGGTTGGAGGAAAAGACATCAATAATGGCACTAAATCATTTGCTTTTGGATCAAGAGGTCAAGACAATGGTTCCCTAAAGGCAATGAAGATGCCACCCCCTGTGGAAGGAAATGAGCTGAGTAGATTTAGTGACCCCCCTGGAGATGCGTACTTAGATGATTTATTTCATCCAACAGATAAACAACCTGGGAAGGTTGTACTTGAGGCATCCACATCTACATCTACTTCACATCTGGCTAAAGGTAATGCATCTATGATTGATGGTGGGAAAAATGACCTGGCTAAAGAGTTGAGGGCTACAATTGCTCGAAAGCAATGGGAGAAGGAGAGTGAAAATGGACAGGCAAACAATGGTGGGAACCTTTTACACCGAGTGATGATAGGTGTTCTAAAAGATGACGTAATTGATATAGATGGTTTGGTCTTCGATGAAAAACTTCCTGGAGAAAACCTTTTTCCTCTGCAGGCTGTTGAGTTCAGCAAATTAGTTAGTTCACTAAGACCAGAGGAATCAGAAGATGTGATTGTCTCTGCATGTCGGAAACTTATTGGTATATTTCACCAACGTCCAGAGCAGAAGATTGTTTTTGTTACCCAGCATGGTTTACTTCCACTAACCGACTTGCTAGAAGTTCCTAAAACACGTGTCATATGTTCTGTGCTTCAGCTTATAAATCAAATAATTAAAGACAACACTGATTTTCAAGAAAACGCATGTCTTGTTGGATTGATTCCTGCAGTCATGAGCTTTGCAGTGCCTGATCGTCCCCGAGAGATCCGTATGGAAGCAGCTTACTTTTTACAACAGCTTTGTCAGTCAAGTTCGTTGACTTTACAAATGTTTATAGCTTGCCGTGGAATACCTGTTTTGGTGGGATTTCTTGAGGCTAATTATACCAAGTACAGGGAGATGGTTCATCTGGCTATTGATGGCATGTGGCAGGTATTTAAGCTACAGCAGTCAACGCCTAGAAATGATTTTTGTCGGATCGCTGCAAAGAATGGAATACTCCTTAGGCTTATAAATACTCTATATAGCTTAAATGAGTCAACTCGACTAGTTTCTACATCTGTTGGGGGTGGATTTTTGGTTGATGGTTCGGCTCAACGGCCACGTTCTGGTATCTTGGATTCTACACATCCTTTTATCAATCAGAATGAGGCACTGCTCTCTTCAGTAGATCAGCAAGATATCCCTAAAGTGAGGCGTGGAGTACTTGATCATCACTTAGAACCTTCACATGCTTCATCCTCCAATCCTCGTAGATCAGATGCTAATTATCCCTTGGATGTTGATAGACCTCAATCAAGCAATGCAGCAGTTGAAGTTGTATCGCTAGAGAAGAGTTCGAATCTAGCATCCAGGGAATCTTCAGCAGGTACATTAAAAGAGCGAGAAAATGTAGATCGTTGGAAAACTGATCCTTCTCGAGTGGATGTTGAACCCAGACAGCAGCGTATTAGTATTTCTGCTAACAGGACATCAACAGATAGGCATCCAAAATCGACAGAATCTGTATCAAATGGGTTATCAGTAACAGGAGCTACACAGCAAGAGCAAGTTAGGCCTCTTCTTAGCTTGTTGGAGAAAGAGCCCCCATCTGGACGTTTTTCTGGACAGCTTGAGTATGTACGTCAGTTTTCGGGATTAGAAAGACATGAAAGTGTACTCCCTTTGTTACATGCCTCTGAAAAGAAAACAAATGGTGAACTAGACTTTTTGATGGCAGAGTTTGCAGATGTTTCTCAACGTGGAAGGGAAAATGGAAATCTTGACTCCAGCGCTAGAGTGTCTCAAAAAGTCACTCCCAAGAAATTAGGGACTCAGGGTTCTGGTGAAGGAGCTGCTTCCACATCTGGGATTGTATCTCAGACAGCATCAGGTGTACTGTCTGGTTCAGGTGTTCTAAATGCTAGACCAGGTAGTGCTACTTCATCTGGGCTACTTTCGGATTCATCATTGAATGCAGAAGTTACCAGAGAGTACTTAGAAAAAGTGGCAGATCTTCTGCTTGAGTTTGCACAAGCCGACACAACAGTAAAGTCTTACATGTGTAGCCAAAGCTTGCTCAGTCGTCTTTTCCAGATGTTTAATAGGGTGGAGCCTCCTATTCTGTTGAAGATACTGAGGTGTATCAATCATCTGTCAACTGACCCAAATTGCTTAGAAAATCTTCAGCGTGCTGAAGCAATAAAATACTTGATACCGAATCTTGAACTCAAAGAAGGGTCTCTGGTATCAGAGATACATCATGAGGTCCTGCACGCACTGTTCAATCTATGCAAGATAAATAAGAGGAGACAAGAACAAGCAGCTGAAAATGGAATCATTCCCCATTTGATGCAATTTATCACATCAAATTCTCCCTTGAAACAATACGCATTACCTCTACTATGTGACATGGCTCATGCATCTCGCAATTCAAGGGAGCAGTTAAGGGCTCATGGTGGTTTGGATGTATATTTGAACCTTCTTGAGGATGAGTTTTGGTCTGTGACAGCATTGGATTCTATTGCTGTTTGCTTAGCCCACGACAATGACAATAAGAAGGTTGAACAAGCATTGCTGAAAAAGGATGCAGTTCAGAAGCTTGTGAAGTTCTTCCAGTGCTGTCCAGAGCAGCACTTTGTACATATATTGGAGCCATTCTTGAAAATCATCACAAAATCTGCACGGATCAATACCACATTGGCTGTTAATGGATTAACACCATTGCTCATTGCAAGGCTTGATCATCAGGATGCTATAGCTCGTCTTAATTTACTCAGGCTAATAAAGGCTGTTTATGAGCATCACCCTCAGCCCAAGAAGTTGATAGTGGAGAATGATCTGCCTGAAAAACTTCAAAACTTAATAGGGGAACGGAGAGATGGACAAGTGTTGGTCAAACAGATGGCTACTTCGTTACTTAAAGCTCTACACATAAACACCGTTTTGTAA 4212 0.4138 MSRQSTSSAFTKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLHQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTLRNIEDDDSGDAEVPGGDHKSAGENSSVEKEDSAKEFSSVAADSSKTHEDNASDSNFLNERTEKADDVPSDQVLTLAIREKSFIQTGSSRLSSNREVVSSEPTSNHEVSSSKEFHEVMMNGDVGSPQSSGMANKVGGKDINNGTKSFAFGSRGQDNGSLKAMKMPPPVEGNELSRFSDPPGDAYLDDLFHPTDKQPGKVVLEASTSTSTSHLAKGNASMIDGGKNDLAKELRATIARKQWEKESENGQANNGGNLLHRVMIGVLKDDVIDIDGLVFDEKLPGENLFPLQAVEFSKLVSSLRPEESEDVIVSACRKLIGIFHQRPEQKIVFVTQHGLLPLTDLLEVPKTRVICSVLQLINQIIKDNTDFQENACLVGLIPAVMSFAVPDRPREIRMEAAYFLQQLCQSSSLTLQMFIACRGIPVLVGFLEANYTKYREMVHLAIDGMWQVFKLQQSTPRNDFCRIAAKNGILLRLINTLYSLNESTRLVSTSVGGGFLVDGSAQRPRSGILDSTHPFINQNEALLSSVDQQDIPKVRRGVLDHHLEPSHASSSNPRRSDANYPLDVDRPQSSNAAVEVVSLEKSSNLASRESSAGTLKERENVDRWKTDPSRVDVEPRQQRISISANRTSTDRHPKSTESVSNGLSVTGATQQEQVRPLLSLLEKEPPSGRFSGQLEYVRQFSGLERHESVLPLLHASEKKTNGELDFLMAEFADVSQRGRENGNLDSSARVSQKVTPKKLGTQGSGEGAASTSGIVSQTASGVLSGSGVLNARPGSATSSGLLSDSSLNAEVTREYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPPILLKILRCINHLSTDPNCLENLQRAEAIKYLIPNLELKEGSLVSEIHHEVLHALFNLCKINKRRQEQAAENGIIPHLMQFITSNSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLEDEFWSVTALDSIAVCLAHDNDNKKVEQALLKKDAVQKLVKFFQCCPEQHFVHILEPFLKIITKSARINTTLAVNGLTPLLIARLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENDLPEKLQNLIGERRDGQVLVKQMATSLLKALHINTVL 1403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3181g00002 1403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Gabi3181g00002 1403 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3181g00002 1403 CDD STKc_Cdc7_like 19 274 - -
Gabi3181g00002 1403 MobiDBLite consensus disorder prediction 883 905 - -
Gabi3181g00002 1403 FunFam MAP3K epsilon protein kinase 1 577 791 - -
Gabi3181g00002 1403 MobiDBLite consensus disorder prediction 1009 1043 - -
Gabi3181g00002 1403 MobiDBLite consensus disorder prediction 1010 1043 - -
Gabi3181g00002 1403 FunFam MAP3K epsilon protein kinase 1 17 305 - -
Gabi3181g00002 1403 Gene3D - 1071 1400 IPR011989 -
Gabi3181g00002 1403 Gene3D - 574 788 IPR011989 -
Gabi3181g00002 1403 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Gabi3181g00002 1403 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Gabi3181g00002 1403 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Gabi3181g00002 1403 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Gabi3181g00002 1403 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3181g00002 1403 SUPERFAMILY ARM repeat 1272 1394 IPR016024 -
Gabi3181g00002 1403 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Gabi3181g00002 1403 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 16 727 - -
Gabi3181g00002 1403 FunFam MAP3K epsilon protein kinase 1-like 1059 1398 - -
Gabi3181g00002 1403 MobiDBLite consensus disorder prediction 291 327 - -
Gabi3181g00002 1403 MobiDBLite consensus disorder prediction 833 942 - -
Gabi3181g00002 1403 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Gabi3181g00002 1403 MobiDBLite consensus disorder prediction 376 401 - -
Gabi3181g00002 1403 MobiDBLite consensus disorder prediction 907 942 - -
Gabi3181g00002 1403 SMART arm_5 1188 1227 IPR000225 GO:0005515
Gabi3181g00002 1403 SMART arm_5 1142 1186 IPR000225 GO:0005515
Gabi3181g00002 1403 SMART arm_5 1101 1141 IPR000225 GO:0005515
Gabi3181g00002 1403 SMART arm_5 613 653 IPR000225 GO:0005515
Gabi3181g00002 1403 MobiDBLite consensus disorder prediction 376 397 - -
Gabi3181g00002 1403 MobiDBLite consensus disorder prediction 291 358 - -
Gabi3181g00002 1403 Gene3D Transferase(Phosphotransferase) domain 1 17 305 - -
Gabi3181g00002 1403 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3181g00002 1403 MobiDBLite consensus disorder prediction 337 358 - -
Gabi3181g00002 1403 SUPERFAMILY ARM repeat 585 1294 IPR016024 -
Gabi3181g00002 1403 MobiDBLite consensus disorder prediction 836 882 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3181g00002 Gabi-Chr3181 10319 39676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3181g00002 1 1403 MAP Kinase Kinase Kinase AT3G13530 71.890 0.0 1984
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Gabi3181g00002 Pkinase 1.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3181g00002 - - gmx:100813256 2478.74