Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3181g00001 ATACAGTGGTTTGGAGATGCTGAAAAACTAACCAAAGCGCTTTTCTCGTTTGCCAGCAAGCTTGCTCCCGTCATTATATTTGTTGATGAAGTTGACAGTTTGCTTGGTGCTCGAGGTGGTGCTTTTGAGCATGAGGCTACTAGAAGAATGAGGAACGAGTTTATGGCAGCTTGGGATGGATTGAGGTCAAAAGAAAGCCAAAGAATCCTCATTCTTGGTGCAACAAACCGGCCATTTGACCTTGATGATGCTGTTATTCGTCGCTTACCAAGGAGGATATATGTCGATTTACCAGATGCTGAAAACCGATTGAAGATTTTGAGAATATTTCTAGCACAAGAAAATTTGGATACTGATTTTCAGTTTGATAAACTTGCTAACTTGACTGATGGGTACTCTGGCAGTGATTTGAAGAACCTCTGTGTTGCTGCAGCATATAGACCTGTTCAGGAGCTCTTAGAGGAAGAAAAGAAGGGAGGCAATAACAGTACATCTTCGGTATTAAGGCCTCTTAATTTGGATGATTTTGTTCAGTCAAAATCCAAGGTGGGTCCATCAGTTGCCTATGATGCAACAAGCATGAATGAATTGAGGAAGTGGAATGAAATGTACGGAGAAGGCGGTAGTAGGACAAAGTCACCATTTGGATTTGGGAGCTGA 660 0.4197 IQWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKESQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRLKILRIFLAQENLDTDFQFDKLANLTDGYSGSDLKNLCVAAAYRPVQELLEEEKKGGNNSTSSVLRPLNLDDFVQSKSKVGPSVAYDATSMNELRKWNEMYGEGGSRTKSPFGFGS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3181g00001 219 Gene3D - 2 201 IPR027417 -
Gabi3181g00001 219 Pfam ATPase family associated with various cellular activities (AAA) 2 96 IPR003959 GO:0005524|GO:0016887
Gabi3181g00001 219 ProSitePatterns AAA-protein family signature. 69 88 IPR003960 GO:0005524|GO:0016887
Gabi3181g00001 219 Gene3D - 98 183 - -
Gabi3181g00001 219 Pfam AAA+ lid domain 119 154 IPR041569 -
Gabi3181g00001 219 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 155 IPR027417 -
Gabi3181g00001 219 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 2 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3181g00001 Gabi-Chr3181 5691 9744 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3181g00001 2 161 Calmodulin-binding Proteins AT3G56690 30.675 1.56e-19 84.7