Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3177g00037 ATGAATGCCTCCCTTTGCACGTGCTACTCACACACTCCCGCACCAGCGTTAACGTTTTCTTCTTTCTCAAAGGAAAAAAGAAGCTTAATACCACATTATTCACCATGCCAACACAATCACAAGACCAACGTGTATTACCCCACAACTTCTCATATAAGAATCAACATCACCAAGATTCTCTTCTGCTCTCTATTACCAACACAAGAGTTTTCACCACTAATGGCATCACCTACGGCACCATGTGGGGCTTGCAAGTTCTTGAGGAGGAAGTGCATTGAAGGGTGCATCTTTGCACCTTACTTTAGTTCAGACCAGGGTGCAGCCAAGTTTGCAGCTGTGCACAAGGTGTTTGGTGCTAGCAATGTGTCAAAGCTCTTACTGAGTGTTCCAGTGAACCACCGCCATGAAGCGGCGGAGACTATATCATACGAGGCTCAAGAAAGGCTATCTGATCCTGTTTATGGTTGTGTATCCACCATTATTGCTTTACAACAACAGGTGGCATCTTTGCAAGCAGAGGTCACTATGATGCGAACTCACGTGATAAATAGTCGGTTTGGACATTCAAGTGCCCTTCAGCAGCAGCAGCAGCAGCTAAACATGAATGTAGGGCTGCAGCCAGCTTACTACAACAATTCATTTGCTTCCATTAACCACATGAACCCAAGCAGCTTCAACCCTGGTTTTGACCATGCAATGGGGACAGCATCCTCATCACACAGCTTAGAGCCTCTTCAACTCTCTGGGTTGTCCCAATATGAAGAAGAGGACGAGGAAAGAAGGTTTCATTAA 792 0.4558 MNASLCTCYSHTPAPALTFSSFSKEKRSLIPHYSPCQHNHKTNVYYPTTSHIRINITKILFCSLLPTQEFSPLMASPTAPCGACKFLRRKCIEGCIFAPYFSSDQGAAKFAAVHKVFGASNVSKLLLSVPVNHRHEAAETISYEAQERLSDPVYGCVSTIIALQQQVASLQAEVTMMRTHVINSRFGHSSALQQQQQQLNMNVGLQPAYYNNSFASINHMNPSSFNPGFDHAMGTASSSHSLEPLQLSGLSQYEEEDEERRFH 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3177g00037 263 ProSiteProfiles LOB domain profile. 79 181 IPR004883 -
Gabi3177g00037 263 PANTHER LOB DOMAIN CONTAINING PROTEIN 74 223 - -
Gabi3177g00037 263 Pfam Lateral organ boundaries (LOB) domain 80 177 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3177g00037 Gabi-Chr3177 460943 462264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3177g00037 79 258 AS2 family AT3G03760 57.143 2.99e-61 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi3177g00037 LOB 6.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3177g00037 - - aprc:113866578 260.766