Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3177g00032 ATGGCAAATAAGTTCCATTCTTCAGTGCTTCTAGTTTTGGTTACAGTGTTACTTTCAATCTATTCTTCAGAGCAACTACAATCTTCCCACTCTCAGACCCTTCTAAGAATACAACAGCTTTTGAACTTTCCTTCTGTTTTAAGCAGCTGGAAATACAACACAGACTTTTGCAACACAGATTCAAAATCTTCTCTTACTGTTGTGTGCTATGAGAACACCATAACTCAGCTGCATATAGTTGGTGAAACAAGAGCTTTGCTTCTTCCAAGAAATTTCTCAATAGATTCCTTTGTCACAACACTTGTGAAGCTTCCAAGTTTGAAAGTCCTCACACTGGTTTCTCTTGGTATATGGGGTCCATTGCCTGGTAAGATTGCTCGTTTGTCATCACTGGAAATAGTTAATGTTAGTTCAAATTTTCTATATGGAGAAATCCCTCAAGAGTTTCCATTATTGTCACATCTCCAAACACTCATTCTTGATGATAACATGTTTTCTGGCCATCTTCCTGAGTGGTTGGATTCTTTTCCAGCCTTAACTGTGTTGAGTTTGAAAAACAATTTGTTCAATGGTTCTCTTCCGGATTCGCTTAGTAGCTTGGAGGATCTGAGAATTCTTTCACTTTCTCATAATCATTTTTATGGATCAGTACCTGATTTGAACCGTTTGACAAATCTTCAAGTGTTGGAATTGGATAACAATGCTTTTGGACCTCAGTTTCCTAGGCTTGGTGGTAACAAGTTGGTTACTTTAGTACTAAGGAACAACAAGTTTAGGTCTAGTGCTCCTGATGAATTGAGCTCTTATTATCAACTTGAGAGACTTGATATTTCATCAAATACATTTGTTGGGCCATTCCAGTTAGCACTGTTATCACTTCCTTCAATTACTTATCTCAACATTTCTGGTAACAAATTAACTGGGATGCTTTTTGAGAATGTGTCTTGCAATTCTGAACTTGAAGCAGTGGATTTATCCTCAAATCTTTTGACTGGGAGCTTGCCAAATTGTTTAGTGTCAGATTCCAATGATAGGACTGTTTTGTATGCTAGAAATTGTTTAGAGGAAACAAATCAAGATCAGCATGCACAACCCTTTTGTCATACTGAAGCCTTAGCTGTGGGAATATTACCTGAGAGAAAGAAGCACAAACAAGTTTCTAAGACAGTTCTTTCTCTTGGGATAGTTGGTGGAACTTTTGGAGGAGTAGCACTTGTTGCTTTGCTTTTCCTTATTATTAGAAGAGGAAATGCCAAAAGCAAAATGAAGAATCCTCCAACAAAATTGATATCAGATAATGTAGCTTCTGGATACACCTCTAAGTTATTCTCTGATGCAAGGTATATACCTCAAACAAAGAATTTTGGAACATTTGGCCTTCCACCTTATCGAGCTTTCTCCCTGGAAGAGATTACGGCAGCTACAAACAACTTTGATACAGCTTCTTTTATGGGTGAAGGTTCTCAAGGAAAGATGAACAGAGGTCAACTGAAGGATGGTTCACTTGTTGCCATTAGAAGTGTGAAAATGACCAAAAGCTACAGGACTCAAGACTTTATGCACTACATAGAGCTGATATCAAAATACAGGCATCATCATTTAGCAAGCGCTCTTGGACATTGTTTTGAATGTTATTTAGATGATTCAAGTGTCCGCAGAATATTCATTGTCTTTGAGTACATACCTAATGGCACACTCAAGAGCTGGATCTCAGAAGGACATTATAGAAAGTCCCTGACTTGGACCCAACGCATAGCAGCTGCAATTGGAATAGCAAAGGGCATACAATTTTTGCATAGAGGGATTGTCCCTGGTGCATATTCAAACAATCTGAAAATAACAGATGTTTTACTTGACCAGAATTTTGTTGCAAAAATCAGCAGTTATAACCTGCCTTTGTTATCTAACATGGGAAAGGTTAGTCAAGGAAATCCTCTTAGTGGATTCAAAAGTCCTAGTGTTAACAAAAGTGTAAAAAATGAAGACAAAGCTGATATATATGATTTTGGAGTAATACTGTTGGAGCTCATTCTAGGAAGGACAATAAAGTCAAGGAATGTGAACACTTTAAAGGATCTGTTGCAAGAAAGCATAACAGCTGATGAAGAAGCTAGGAGGAGCATTATAGATTCAGCAGTTAGCAAGGCATGCTTGGATCAATCATTGAGGACAATGATGGAGATTTGTGTGAGGTGCCTAGTTAAAGAGCCAGAAGATAGGCCCTCTTTAGAGGATATTTTGTGGAATTTGCAGTTTGCTGCTCAAGTCCAAGATGCATGGAGAGGGGACTCTCAAAGTAGTGATGGATCTCCCATCTCACCTTTAGCATCTAGAAGAATGACATTCCATTAG 2352 0.3818 MANKFHSSVLLVLVTVLLSIYSSEQLQSSHSQTLLRIQQLLNFPSVLSSWKYNTDFCNTDSKSSLTVVCYENTITQLHIVGETRALLLPRNFSIDSFVTTLVKLPSLKVLTLVSLGIWGPLPGKIARLSSLEIVNVSSNFLYGEIPQEFPLLSHLQTLILDDNMFSGHLPEWLDSFPALTVLSLKNNLFNGSLPDSLSSLEDLRILSLSHNHFYGSVPDLNRLTNLQVLELDNNAFGPQFPRLGGNKLVTLVLRNNKFRSSAPDELSSYYQLERLDISSNTFVGPFQLALLSLPSITYLNISGNKLTGMLFENVSCNSELEAVDLSSNLLTGSLPNCLVSDSNDRTVLYARNCLEETNQDQHAQPFCHTEALAVGILPERKKHKQVSKTVLSLGIVGGTFGGVALVALLFLIIRRGNAKSKMKNPPTKLISDNVASGYTSKLFSDARYIPQTKNFGTFGLPPYRAFSLEEITAATNNFDTASFMGEGSQGKMNRGQLKDGSLVAIRSVKMTKSYRTQDFMHYIELISKYRHHHLASALGHCFECYLDDSSVRRIFIVFEYIPNGTLKSWISEGHYRKSLTWTQRIAAAIGIAKGIQFLHRGIVPGAYSNNLKITDVLLDQNFVAKISSYNLPLLSNMGKVSQGNPLSGFKSPSVNKSVKNEDKADIYDFGVILLELILGRTIKSRNVNTLKDLLQESITADEEARRSIIDSAVSKACLDQSLRTMMEICVRCLVKEPEDRPSLEDILWNLQFAAQVQDAWRGDSQSSDGSPISPLASRRMTFH 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3177g00032 783 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Gabi3177g00032 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase isoform A 246 363 - -
Gabi3177g00032 783 SUPERFAMILY L domain-like 78 354 - -
Gabi3177g00032 783 SUPERFAMILY Protein kinase-like (PK-like) 459 752 IPR011009 -
Gabi3177g00032 783 Pfam Protein tyrosine and serine/threonine kinase 483 748 IPR001245 GO:0004672|GO:0006468
Gabi3177g00032 783 Gene3D Phosphorylase Kinase; domain 1 445 560 - -
Gabi3177g00032 783 ProSiteProfiles Leucine-rich repeat profile. 202 224 IPR001611 GO:0005515
Gabi3177g00032 783 Gene3D Ribonuclease Inhibitor 27 244 IPR032675 -
Gabi3177g00032 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 561 766 - -
Gabi3177g00032 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 451 560 - -
Gabi3177g00032 783 Gene3D Ribonuclease Inhibitor 245 347 IPR032675 -
Gabi3177g00032 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 245 - -
Gabi3177g00032 783 ProSiteProfiles Protein kinase domain profile. 478 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3177g00032 783 MobiDBLite consensus disorder prediction 761 783 - -
Gabi3177g00032 783 PANTHER UNNAMED PRODUCT 86 680 - -
Gabi3177g00032 783 Gene3D Transferase(Phosphotransferase) domain 1 562 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3177g00032 Gabi-Chr3177 441514 448276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3177g00032 43 777 Miscellaneous Gene Families AT3G03770 62.213 0.0 887
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Gabi3177g00032 PK_Tyr_Ser-Thr 2.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3177g00032 - - gmx:100813207 1271.53