Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3159g00024 ATGGCTGGTTTGGATTTAGGCACAGCTTCACGCTTTGTTCAAAATCTCCACAGACCAGACTTCAACCAACAACAACAAGAATCCCAAGATGATGCCAACCAACCAGACCCCTTTTCCACCGAAGATGGACCCCACCAAGGATTCGACCTCACCTCCGCCGGTCCCGGCGATATCGTTGGCCGTCGACCACGGGGACGCCCGCCGGGCTCCAAGAACAAACCGAAGCCGCCGGTCATCATAACGAGGGAGAGCGCAAACACGCTTCGGGCTCATATTCTCGAAGTTGGCAACGGCTGCGACGTGTTCGACTGCGTCTCCACCTACGCACGGCGGCGCCAGCGGGGGATCTGTATTCTGAGTGGGAGTGGCACCGTCACCAATGTCAGCTTGAGGCAGCCAGCATCAGCGGGAGCCATCGTCACCCTACACGGAAGGTTCGAGATATTGTCACTCTCCGGATCTTTCCTACCTCCTCCGGCTCCGCCAGGCGCGACGAGCCTCACCATATACCTTGCCGGAGGGCAAGGACAAGTGGTGGGTGGGAGTGTGGTCGGCGAGTTGACCGCAGCGGGACCCGTGACTGTAATCGCAGCTTCGTTCACTAACGTGGCTTATGAGAGGTTACCTTTGGATGAGGAAGAACAACTTCAGATACAACCGCCGTCAGGAGGTGGTCAGAGTTCCGGCGGAGGAGGCGGCGGTGGTTTGGGGAACAACCCATTTCCTGACCCATCGTCTGGACTTCCCTTCTTCAATTTGCCGCTTCAGACTATGCAGAATGTTCAGTTACCAGTGGATGGTTGGGCGGGAAAACCATATTGA 822 0.5693 MAGLDLGTASRFVQNLHRPDFNQQQQESQDDANQPDPFSTEDGPHQGFDLTSAGPGDIVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFDCVSTYARRRQRGICILSGSGTVTNVSLRQPASAGAIVTLHGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGSVVGELTAAGPVTVIAASFTNVAYERLPLDEEEQLQIQPPSGGGQSSGGGGGGGLGNNPFPDPSSGLPFFNLPLQTMQNVQLPVDGWAGKPY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3159g00024 273 MobiDBLite consensus disorder prediction 15 40 - -
Gabi3159g00024 273 FunFam AT-hook motif nuclear-localized protein 88 215 - -
Gabi3159g00024 273 CDD DUF296 89 172 IPR005175 -
Gabi3159g00024 273 SUPERFAMILY AF0104/ALDC/Ptd012-like 85 220 - -
Gabi3159g00024 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 24 229 IPR014476 GO:0003680
Gabi3159g00024 273 Gene3D - 88 221 - -
Gabi3159g00024 273 ProSiteProfiles PPC domain profile profile. 85 222 IPR005175 -
Gabi3159g00024 273 MobiDBLite consensus disorder prediction 217 252 - -
Gabi3159g00024 273 Pfam Plants and Prokaryotes Conserved (PCC) domain 89 202 IPR005175 -
Gabi3159g00024 273 MobiDBLite consensus disorder prediction 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3159g00024 Gabi-Chr3159 386561 387382 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3159g00024 1 271 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 65.772 6.08e-100 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3159g00024 - - qsa:O6P43_024484 394.43