Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3159g00024 | ATGGCTGGTTTGGATTTAGGCACAGCTTCACGCTTTGTTCAAAATCTCCACAGACCAGACTTCAACCAACAACAACAAGAATCCCAAGATGATGCCAACCAACCAGACCCCTTTTCCACCGAAGATGGACCCCACCAAGGATTCGACCTCACCTCCGCCGGTCCCGGCGATATCGTTGGCCGTCGACCACGGGGACGCCCGCCGGGCTCCAAGAACAAACCGAAGCCGCCGGTCATCATAACGAGGGAGAGCGCAAACACGCTTCGGGCTCATATTCTCGAAGTTGGCAACGGCTGCGACGTGTTCGACTGCGTCTCCACCTACGCACGGCGGCGCCAGCGGGGGATCTGTATTCTGAGTGGGAGTGGCACCGTCACCAATGTCAGCTTGAGGCAGCCAGCATCAGCGGGAGCCATCGTCACCCTACACGGAAGGTTCGAGATATTGTCACTCTCCGGATCTTTCCTACCTCCTCCGGCTCCGCCAGGCGCGACGAGCCTCACCATATACCTTGCCGGAGGGCAAGGACAAGTGGTGGGTGGGAGTGTGGTCGGCGAGTTGACCGCAGCGGGACCCGTGACTGTAATCGCAGCTTCGTTCACTAACGTGGCTTATGAGAGGTTACCTTTGGATGAGGAAGAACAACTTCAGATACAACCGCCGTCAGGAGGTGGTCAGAGTTCCGGCGGAGGAGGCGGCGGTGGTTTGGGGAACAACCCATTTCCTGACCCATCGTCTGGACTTCCCTTCTTCAATTTGCCGCTTCAGACTATGCAGAATGTTCAGTTACCAGTGGATGGTTGGGCGGGAAAACCATATTGA | 822 | 0.5693 | MAGLDLGTASRFVQNLHRPDFNQQQQESQDDANQPDPFSTEDGPHQGFDLTSAGPGDIVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFDCVSTYARRRQRGICILSGSGTVTNVSLRQPASAGAIVTLHGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGSVVGELTAAGPVTVIAASFTNVAYERLPLDEEEQLQIQPPSGGGQSSGGGGGGGLGNNPFPDPSSGLPFFNLPLQTMQNVQLPVDGWAGKPY | 273 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3159g00024 | 273 | MobiDBLite | consensus disorder prediction | 15 | 40 | - | - | |
Gabi3159g00024 | 273 | FunFam | AT-hook motif nuclear-localized protein | 88 | 215 | - | - | |
Gabi3159g00024 | 273 | CDD | DUF296 | 89 | 172 | IPR005175 | - | |
Gabi3159g00024 | 273 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 85 | 220 | - | - | |
Gabi3159g00024 | 273 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 24 | 229 | IPR014476 | GO:0003680 | |
Gabi3159g00024 | 273 | Gene3D | - | 88 | 221 | - | - | |
Gabi3159g00024 | 273 | ProSiteProfiles | PPC domain profile profile. | 85 | 222 | IPR005175 | - | |
Gabi3159g00024 | 273 | MobiDBLite | consensus disorder prediction | 217 | 252 | - | - | |
Gabi3159g00024 | 273 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 89 | 202 | IPR005175 | - | |
Gabi3159g00024 | 273 | MobiDBLite | consensus disorder prediction | 1 | 78 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi3159g00024 | Gabi-Chr3159 | 386561 | 387382 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3159g00024 | 1 | 271 | AT-hook Motif Nuclear Localized (AHL) Family | AT4G17800 | 65.772 | 6.08e-100 | 292 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi3159g00024 | - | - | qsa:O6P43_024484 | 394.43 |