Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3158g00033 ATGGATATGGCTTGTAGGTTGCCACAGTCAAGAATGTCACATGGAGGTGTGGGGACAAGTCTCAGACACAAACCAGTAGGTCGTTTTGATTTTAGAGGGAGAGGTTTTGGCTGTGCATTTCTTGGCAACTCGAGAAGTGTGTCGAGGAGGTCGTGTTTTAGTGGGATGAACAAAGTCAGTGGTGTCTCTGCTTGTTGGAATAACTCAAGAGTTGTTTCTGGTGGTCAGTTTAAAGTTTTGAATATGAAGAGAAGTTTGTCTTGTAAGAATAGAAATCTTTTTTTGGGGTCTAGAGTCATTTGGTCGAAGTGTCAGGGTAATGATTCTTTAGCTTATGTTAATGGCAATGGCCGGAATGTTGATTGTGTGGAAGATTCAAGTGAGGATGCAGGGTTGGGGCCCATTTCTAGTGCTGAACTGGATGCACCTTTGGAGGAAGAAGAAGAAGGGGAAGCCAGGAGGAAAGAAGGAGGGAGTGAAATAGGAATAGAGGAACGAAGTGTGGATGAACTGAAAGAACTATTGCAAAAGGCCTTGAAGGAGCTAGAAGTTGCACAAATAAATAGCACCATGTTTGAGGAAAAGGTTAAAAAAATATCAGAGACTGCCATTTTTTTGCACGATGAGGCAGCACGTGCTTGGAACGATGTTAATTCTACCCTTGACACCATCCAAGAAATTGCTAACGAAGAACATATGGCCAAAGAAGCTGTCCAAAAAGCAGCAATGGCTCTTTCGTTAGCTGAGGCAAGGGTTCAAGTAGCCGTAGAATCTCTGGATGTTGCAAGAGAGGCACCTGATTCGGCACAAGGTTTTAATGAGAGCAATGATGACAAGGACATAATGGAAGAGGAGAAAACAGTATTGGTTGGTCAAGAAGAAATCAAGGAATGCCAGGCAAATTTAGCCAATTGTGAGGCAGAACTGAGGCGCTTGCAAAATAGAAAGGAGGAGTTGCAGAAGGAAGTGAATAAATTGCATGTAATTGCCGAAAAGGCACAGCTGAGTGCAGTGAAAGCTGAGGAGGATGTTTCAAATATAATGCTTTTAGCGGAGCAAGCTGTTGCCTTTGAACTTGAGGCTACACAAAGTGTTAATGATGCAGAGATTGCCTTACAGCGAGCAGAAAAGTCTGTTTTTAATTTGAATGCCGATACTATGGAAACTATACAAGTACAAGATGTTGTGGCTGTTCCTGAGGAGGAAAAAGTGGTTCAAGGTTTTTCTGGTGATGTCACTGTTGAAAGAGACAGAGATTTGGCAATTGATGATGAATCTTTGCTTGCCAAGTTATCATCTGAAACACTATCTGATAGAACCAGCCAAGTTTTGGAAGACATAACACAGTCTGATTATTTAAGTGATAATGAGAATTCTGTTCAAACAAAAAAGCAGGAGGCACAGAAAGATTTGACTAGAGATAGTTCACCCTTTGCTCCCAAGGCATTACTGAAAAAGTCTTCCCGATTTTTTTCTGCATCATTCTTCTCTTTTACTGAAGATGGGACTGACTTCACACCTGCATCAGTTTTCCAGAGCCTCGTGTTATCTGCACAGAAGCAGTTGCCCAAGCTGATTCTTGGGTTATTGCTAATGGGAGCAGGGGTTGCCTTCTATGCTAATAGAACAGAGAGGAATGGTCAGCTGCTTCAACAGACAGATGTTATTGTGACCAGTGTTGAAGAAGTTTCCTCTAGTGCAAAGCCTTTGGTTAGACAACTTCAGAAACTCCCCAAGAAAATTAAGAAAATCATTGCGTCATTACCTCATCAAGAGGTGAATGAGGAAGAAGCATCCCTCTTTGACATGCTCTGGTTATTACTTGCAAGTGTTATATTTGTGCCAATTTTTCAAAAAATCCCTGGAGGCAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATTTTGATTGGTCCGTATGGTCTCTCAATTATTCGTCATGTTCATGGGACAAAAGCAATAGCTGAATTTGGAGTTGTGTTCCTTTTATTCAATATTGGTCTGGAGCTCTCTGTTGAAAGGCTTAGCTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCACAGGTTTTGGCAACTGCTGTAGTTGTAGGCTTGGTGGCTCATTATATTTGTGGCCAACCTGGACCTGCTGCTATTGTCATTGGGAACGGCCTTGCATTATCATCCACCGCTGTTGTTCTGCAGGTGTTGCAGGAGAGAGGGGAGAGCACATCACGGCATGGACGGGCTACATTTTCTGTTTTACTTTTTCAGGATCTGGCTGTCGTGGTCTTGCTAATACTCATACCTCTTATTTCACCTAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCCATTGCTGAAGCTCTTGGACTAGCTGCTGTTAAGGCAGCAGTTGCCATCACTGCCATAATTGCAGGTGGACGATTGCTCCTTCGACCAATATACAAGCAAGTTGCAGAAAATCAAAATGCAGAAATATTCTCGGCCAATACACTCCTTGTTATTCTCGGGACTAGTCTTCTTACAGCCAGGGCAGGGCTTTCCATGGCATTGGGAGCATTTTTGGCTGGTTTACTACTGGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTTTTGGGGCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCAAACTTCCCAGTCATCACAGGGACACTGGGACTCTTAATATGCGGCAAGACTATCTTGGTTTCTTTGATGGGTAGAATCTTTGGGATTTCCCTCATTTCTGCCATTAGAGTTGGTCTTCTTCTTGCTCCCGGTGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGTATAATGTCTTCCCAGATGTCCTCTTTGCTGTTTCTTGTTGTCGGCATTTCAATGGCCATCACGCCATGGCTAGCTGCAGGAGGCCAGCTGATTGCTTCCCGTTTTGAGCAGCATGATGTTAGAAGCTTATTACCAGTAGAAAGTGAGACAGATGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTAGGCCAGATCATTGCCCAACTTCTTTCTGAGCGACTTATTCCGTTTGTTGCACTAGACGTGAGGAGTGACAGAGTGGCAGTTGGGCGTGCCCTGGATCTCCCCGTTTACTTTGGAGATGCTGGTAGTCGAGAGGTCCTGCATAAGGTTGGCGCTGAAAGGGCATGTGCTGCAGCAATAACTCTTGATACACCTGGTGCAAATTATAGAACAGTTTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACCTTTGTTCGTGCTCATGATGTTGATCATGGATTGAATTTAGAAAAGGCTGGAGCTACTGCTGTTGTGCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCTGTGCTTTCTCAGGCTAAACTTCCTACATCAGAGATTGCAGCAACTATAAATGAATTCAGATCCCGACATCTGGCTGAGCTCACAGAGCTGTGTGAATTAAGTGGAAGTTCTCTTGGTTATGGATATAATAGAATTATGAGCAAACCCAAGTCTCAATCCCCAGATTCATTAGATGAGACGCAAATCTCTGAAGGGACACTGGCAATATGA 3615 0.4335 MDMACRLPQSRMSHGGVGTSLRHKPVGRFDFRGRGFGCAFLGNSRSVSRRSCFSGMNKVSGVSACWNNSRVVSGGQFKVLNMKRSLSCKNRNLFLGSRVIWSKCQGNDSLAYVNGNGRNVDCVEDSSEDAGLGPISSAELDAPLEEEEEGEARRKEGGSEIGIEERSVDELKELLQKALKELEVAQINSTMFEEKVKKISETAIFLHDEAARAWNDVNSTLDTIQEIANEEHMAKEAVQKAAMALSLAEARVQVAVESLDVAREAPDSAQGFNESNDDKDIMEEEKTVLVGQEEIKECQANLANCEAELRRLQNRKEELQKEVNKLHVIAEKAQLSAVKAEEDVSNIMLLAEQAVAFELEATQSVNDAEIALQRAEKSVFNLNADTMETIQVQDVVAVPEEEKVVQGFSGDVTVERDRDLAIDDESLLAKLSSETLSDRTSQVLEDITQSDYLSDNENSVQTKKQEAQKDLTRDSSPFAPKALLKKSSRFFSASFFSFTEDGTDFTPASVFQSLVLSAQKQLPKLILGLLLMGAGVAFYANRTERNGQLLQQTDVIVTSVEEVSSSAKPLVRQLQKLPKKIKKIIASLPHQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAVVVGLVAHYICGQPGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVITGTLGLLICGKTILVSLMGRIFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQMSSLLFLVVGISMAITPWLAAGGQLIASRFEQHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLSQAKLPTSEIAATINEFRSRHLAELTELCELSGSSLGYGYNRIMSKPKSQSPDSLDETQISEGTLAI 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3158g00033 1204 MobiDBLite consensus disorder prediction 124 159 - -
Gabi3158g00033 1204 MobiDBLite consensus disorder prediction 1183 1204 - -
Gabi3158g00033 1204 Coils Coil 161 188 - -
Gabi3158g00033 1204 Gene3D - 596 984 IPR038770 -
Gabi3158g00033 1204 FunFam K(+) efflux antiporter 2 chloroplastic 596 982 - -
Gabi3158g00033 1204 Pfam TrkA-N domain 1009 1122 IPR003148 GO:0006813
Gabi3158g00033 1204 Pfam Sodium/hydrogen exchanger family 606 976 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Gabi3158g00033 1204 ProSiteProfiles RCK N-terminal domain profile. 1008 1130 IPR003148 GO:0006813
Gabi3158g00033 1204 FunFam K(+) efflux antiporter 2 chloroplastic 1004 1168 - -
Gabi3158g00033 1204 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1005 1146 IPR036291 -
Gabi3158g00033 1204 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 203 1193 - -
Gabi3158g00033 1204 Gene3D - 1004 1168 - -
Gabi3158g00033 1204 Coils Coil 365 385 - -
Gabi3158g00033 1204 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 607 887 IPR004771 GO:0006812|GO:0008324|GO:0016020
Gabi3158g00033 1204 Coils Coil 295 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3158g00033 Gabi-Chr3158 321772 338177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3158g00033 1 1204 Inorganic Solute Cotransporters AT4G00630 66.452 0.0 1440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3158g00033 K03455 - gmx:100798822 1877.06