Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3158g00019 ATGGGAGTCGCTTTTCATATCATCCACGTTGCAACTGGAGAAGATATTGGAACAAAAATTATGGCATATTGTCAGCAGGGTCTTAGATCTGTAGGCATTTTGTCAGGCACTGGTGTTGTATCAACTGCCACACTTCGTCGACCTTCAGCTCCAGGTGGCACTGTCACATATGAGGGGCGCTTTGAAATGCTGTCCCTATCAGGCTCATTTTTGCTTACTGAGAGGGAAGGCTTACTCCATCGAATTGGAGGAATAAGTATTTCCTTTGCTGGCCCTGATGGACGTGTCATTGGGGGAGGAATTGTTGGTTTGCTTATTGCTGCTAGTCCTGTTCAGGTGGTAGTTTGTAGCTTTCCATGGAGTGGATCAAAGACAAAGAAGAGGAAAAGGGAAGGATCAGAAAGTGAAGTGGAGTCAGAACATCAGGGAGTTCATAATCCAGTTGCAGTGAATAATAGCATTTATCCAAATTAA 474 0.443 MGVAFHIIHVATGEDIGTKIMAYCQQGLRSVGILSGTGVVSTATLRRPSAPGGTVTYEGRFEMLSLSGSFLLTEREGLLHRIGGISISFAGPDGRVIGGGIVGLLIAASPVQVVVCSFPWSGSKTKKRKREGSESEVESEHQGVHNPVAVNNSIYPN 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3158g00019 157 Pfam Plants and Prokaryotes Conserved (PCC) domain 6 119 IPR005175 -
Gabi3158g00019 157 ProSiteProfiles PPC domain profile profile. 1 139 IPR005175 -
Gabi3158g00019 157 CDD DUF296 6 118 IPR005175 -
Gabi3158g00019 157 Gene3D - 5 142 - -
Gabi3158g00019 157 MobiDBLite consensus disorder prediction 123 157 - -
Gabi3158g00019 157 MobiDBLite consensus disorder prediction 124 141 - -
Gabi3158g00019 157 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 3 141 IPR039605 GO:0003680
Gabi3158g00019 157 SUPERFAMILY AF0104/ALDC/Ptd012-like 5 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3158g00019 Gabi-Chr3158 210927 212852 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3158g00019 6 131 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 56.923 3.76e-44 147