Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3158g00004 ATGGAAGTAAATGAGAAATGTGATATGTATAGCTTTGGAGTATTAGCATTGGAAATACTCTTTGGAAAGCAGCCCAGTGATGTCATGTCTTCTTCATGGATTGTTGTGGCCTCAACACTAGATAATATGTCATTGCTGGATAAGTTGGACCAACGTCTCCCTCATCCTATATATCCTATTGTGAATGATTTATTATCAATTGCAAGGATAGCAATTGGTTGCTTGAATGAAAGCCCACGTTCTCGCCCTACCATGAAGCAGGTTGTTAAGGAGCTTGTATTGTCGAAGTAA 291 0.3918 MEVNEKCDMYSFGVLALEILFGKQPSDVMSSSWIVVASTLDNMSLLDKLDQRLPHPIYPIVNDLLSIARIAIGCLNESPRSRPTMKQVVKELVLSK 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3158g00004 96 PANTHER LEUCINE RICH REPEAT KINASE 2 1 93 - -
Gabi3158g00004 96 ProSiteProfiles Protein kinase domain profile. 1 94 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3158g00004 96 SUPERFAMILY Protein kinase-like (PK-like) 3 93 IPR011009 -
Gabi3158g00004 96 Gene3D Transferase(Phosphotransferase) domain 1 1 96 - -
Gabi3158g00004 96 Pfam Protein tyrosine and serine/threonine kinase 3 92 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3158g00004 Gabi-Chr3158 65506 65796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3158g00004 6 93 Receptor kinase-like Gene Family AT5G49660 35.789 1.59e-11 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gabi3158g00004 PK_Tyr_Ser-Thr 2.7e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3158g00004 - - gmx:100787487 130.568