Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3154g00036 ATGGCATCAGGGGGAACAGAAGCTTTCCCAGATTTGGGTAAACACTGTCAACAACATGATTGCAACCAGCTAGATTTCCTTCCTTTCGCATGCGACGGTTGCAAACTGGTGTTCTGTGTGGAACACAGATCCTACAAGTCCCATGCGTGCCCGAAATCCGACCACAACAGCAGAAAAGTGGTTGTTTGCGAAACATGTTCCATGTCCATTGAGACCACAGGCCATGTGGGACAAGATGAGGAGGCAATCTTGAAGAGGCATTACAACTCTGGAAACTGTGACCCCAACAAGAAGAAGAAACCCATTTGCCCCGTTAAGCGCTGCAAGCAGATTTTGACGTTTTCTAATAACAGTACTTGTAAAACTTGCAATGTTAAGGTGTGTCTCAAGCACCGTTTCCCTGCTGATCATGCTTGTAGGAAAGGAGTTTCACCCTCCTTCTCATCTTCTGCTGTTACTGATGGAAGGGGGAACAATCGGTTCTTGGCTGCTGCTCTGGCTTCAAAGAAAGAACAAGACTGTGGCAAGAGTGCTGGTCCTCGTTCTACTACTACTAGTTCTCCTTCTGTTAAGGCTTGTTAA 582 0.4656 MASGGTEAFPDLGKHCQQHDCNQLDFLPFACDGCKLVFCVEHRSYKSHACPKSDHNSRKVVVCETCSMSIETTGHVGQDEEAILKRHYNSGNCDPNKKKKPICPVKRCKQILTFSNNSTCKTCNVKVCLKHRFPADHACRKGVSPSFSSSAVTDGRGNNRFLAAALASKKEQDCGKSAGPRSTTTSSPSVKAC 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3154g00036 193 ProSiteProfiles Zinc finger AN1-type profile. 97 147 IPR000058 GO:0008270
Gabi3154g00036 193 Gene3D - 2 69 IPR035896 -
Gabi3154g00036 193 FunFam AN1-type zinc finger protein 2B isoform X1 6 67 - -
Gabi3154g00036 193 SMART AN1_Zf_4 16 55 IPR000058 GO:0008270
Gabi3154g00036 193 SMART AN1_Zf_4 103 144 IPR000058 GO:0008270
Gabi3154g00036 193 MobiDBLite consensus disorder prediction 169 193 - -
Gabi3154g00036 193 SUPERFAMILY AN1-like Zinc finger 9 59 IPR035896 -
Gabi3154g00036 193 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 8 186 - -
Gabi3154g00036 193 Pfam AN1-like Zinc finger 16 53 IPR000058 GO:0008270
Gabi3154g00036 193 Pfam AN1-like Zinc finger 103 141 IPR000058 GO:0008270
Gabi3154g00036 193 Gene3D - 79 155 IPR035896 -
Gabi3154g00036 193 SUPERFAMILY AN1-like Zinc finger 95 141 IPR035896 -
Gabi3154g00036 193 ProSiteProfiles Zinc finger AN1-type profile. 10 58 IPR000058 GO:0008270
Gabi3154g00036 193 MobiDBLite consensus disorder prediction 177 193 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3154g00036 1 174 C2H2 Transcription Factor Family AT3G28210 63.793 6.70e-78 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3154g00036 - - aprc:113867149 326.25