Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3154g00027 ATGGCAGATGAGGTGGTTTTGCTAGATTTCTGGCCAAGTCCTTTTGGGATGAGGATCAGAATTGCACTTGCTGAAAAGGGTATCAAATATGAGTACAAAGAAGAGGACTTGAGGAACAAGAGTCCTCTGCTCCTCCAAATGAACCCGGTTCACAAGAAAATCCCGGTTCTTATCCACAATGGAAAATCTCCTTTGTTGCCTTCTGATCCTTACCAGAGAGCACAGGCTAGATTCTGGGCTGATTTTGTTGACAAGAAGATATATGAAATTGGAAGGAAGCTTTGGACAACAAAAGGAGAAGAACAAGAAGCTGCCAAGAAGGACTTCATAGATGCCATTAAATTGTTGGAGGAACAGCTTGGAGACAAGACTTATTTTGGAGGAGACAAGATTGGCTTTGTGGATTTAGCACTTGTTCCATTCTACACTTGGTTTAAAGCTTATGAGACTTTTGGCAACTTCACGACGGAGAGCGAGTGCCCCAAGTTTATTGCTTGGGTCAAGAGGTGCATGCAGAAAGAGAGTGTTTCCAAGTCTCTTCCTGAGCAGGACAAAGTCTATGATTTCATTGTAGAGATAAGAAAGAGGATAGGCATTGAGTAG 603 0.4262 MADEVVLLDFWPSPFGMRIRIALAEKGIKYEYKEEDLRNKSPLLLQMNPVHKKIPVLIHNGKSPLLPSDPYQRAQARFWADFVDKKIYEIGRKLWTTKGEEQEAAKKDFIDAIKLLEEQLGDKTYFGGDKIGFVDLALVPFYTWFKAYETFGNFTTESECPKFIAWVKRCMQKESVSKSLPEQDKVYDFIVEIRKRIGIE 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3154g00027 200 Gene3D Glutaredoxin 1 69 - -
Gabi3154g00027 200 CDD GST_C_Tau 70 193 IPR045074 GO:0004364|GO:0006749
Gabi3154g00027 200 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 91 IPR004045 -
Gabi3154g00027 200 Pfam Glutathione S-transferase, C-terminal domain 103 169 - -
Gabi3154g00027 200 SFLD Glutathione Transferase (cytosolic) 64 172 IPR040079 -
Gabi3154g00027 200 SUPERFAMILY GST C-terminal domain-like 61 197 IPR036282 -
Gabi3154g00027 200 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 188 IPR045073 -
Gabi3154g00027 200 SUPERFAMILY Thioredoxin-like 5 87 IPR036249 -
Gabi3154g00027 200 CDD GST_N_Tau 5 68 - -
Gabi3154g00027 200 FunFam Glutathione S-transferase U20 69 200 - -
Gabi3154g00027 200 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 69 189 IPR010987 -
Gabi3154g00027 200 Gene3D - 70 200 - -
Gabi3154g00027 200 Pfam Glutathione S-transferase, N-terminal domain 6 62 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3154g00027 Gabi-Chr3154 278746 280307 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3154g00027 1 196 Glutathione S-transferase Gene Family AT1G78380 65.581 6.07e-105 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3154g00027 K00799 - gmx:547520 362.844