LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi3154g00025	ATGGCGGATGAGGTGGTTTTGCTAGATTTCTGGCCAAGTCCTTTTGGGATGAGGATTAGAATTGCACTTGCTGAAAAGGGTATCAAGTATGAGTACAAAGAAGAGGACTTGTTGGGGAACAAGAGTCCTCTGCTCCTCCAAATGAACCCGGTTCACAAGAAAATCCCGGTTCTCATTCACAATGGCAAGCCCATTTGTGAATCTCTCATTGCTGTTCAGTACATTGATGAGGTCTGGAATGATAGATCTCCTTTGTTGCCTTCTGACCCTTACCAGAGAGCACAGGCTAGATTCTGGGCTGATTTTGTTGACAAGAAGATATACGTAATTGGAAGGAAGCTATGGACAACAAAAGGAGAAGAACAAGAAACTGCCAAGAAGGACTTCATGGATGCCCTTAAATTGTTGGAGGAACAGCTTGGAGACAAGGCTTATTTTGGAGGAGACAAGTTTGGTTTTGTAGATGTAGCAGTTGTTCCATTCTACACTTGGTTCAAAGGCTATGAAATCTTTGGCAACATTAACACAGAGAAGGAGTGCCCCAAGTTTGTTACTTGGGCCAAGAGGTGCCTGCAGAAAGAGAGTGTTTCCAAGTCTCTTCCTGAACAGGAAAAAGTCTATGATTTCATTGCAGAGAGAAGAAAGAATATAGGCATGGAGTAG	663	0.4314	MADEVVLLDFWPSPFGMRIRIALAEKGIKYEYKEEDLLGNKSPLLLQMNPVHKKIPVLIHNGKPICESLIAVQYIDEVWNDRSPLLPSDPYQRAQARFWADFVDKKIYVIGRKLWTTKGEEQETAKKDFMDALKLLEEQLGDKAYFGGDKFGFVDVAVVPFYTWFKGYEIFGNINTEKECPKFVTWAKRCLQKESVSKSLPEQEKVYDFIAERRKNIGME	220

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi3154g00025	220	FunFam	Tau class glutathione S-transferase	1	88	-	-
	Gabi3154g00025	220	Pfam	Glutathione S-transferase, C-terminal domain	125	189	-	-
	Gabi3154g00025	220	SFLD	Glutathione Transferase (cytosolic)	2	218	IPR040079	-
	Gabi3154g00025	220	SUPERFAMILY	GST C-terminal domain-like	77	217	IPR036282	-
	Gabi3154g00025	220	SUPERFAMILY	Thioredoxin-like	5	108	IPR036249	-
	Gabi3154g00025	220	Gene3D	-	89	220	-	-
	Gabi3154g00025	220	ProSiteProfiles	Soluble glutathione S-transferase N-terminal domain profile.	3	83	IPR004045	-
	Gabi3154g00025	220	CDD	GST_C_Tau	90	210	IPR045074	GO:0004364\|GO:0006749
	Gabi3154g00025	220	ProSiteProfiles	Soluble glutathione S-transferase C-terminal domain profile.	89	209	IPR010987	-
	Gabi3154g00025	220	FunFam	Glutathione S-transferase U20	89	220	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi3154g00025	Gabi-Chr3154	256917	258474	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi3154g00025	1	215	Glutathione S-transferase Gene Family	AT1G78380	68.372	2.30e-112	319

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi3154g00025	K00799		-	gmx:547520	392.889

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