Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3154g00024 ATGGCGGATGAGGTGGTTTTGCTAGATTTCTGGCCAAGTCCTTTTGGGATGAGGATTAGAATTGCACTTGCTGAAAAGGGTATCAAGTATGAGTACAAAGAAGAGGACTTGTTGGGGAACAAGAGTCCTCTGCTCCTCCAAATGAACCCGGTTCACAAGAAAATCCCGGTTCTCATTCATTCTGACCCTTACCAGAGAGCACAGGCTAGATTCTGGGCTGATTTTGTTGACAAGAAGATATACGTAATTGGAAGGAAGCTATGGACAACAAAAGGAGAAGAACAAGAAACTGCCAAGAAGGACTTCATGGATGCCCTTAAATTGTTGGAGGAACAGCTTGGAGACAAGGCTTATTTTGGAGGAGACAAGTTTGGTTTTGTAGATGTAGCAGTTGTTCCATTCTACACTTGGTTCAAAGGCTATGAAATCTTTGGCAACATTAACACAGAGAAGGAGTGCCCCAAGTTTGTTACTTGGGCCAAGAGGTGCCTGCAGAAAGAGAGTGTTTCCAAGTCTCTTCCTGAACAGGAAAAAGTCTATGATTTCATTGCAGAGAGAAGAAAGAATATAGGCATGGAGTAG 582 0.4313 MADEVVLLDFWPSPFGMRIRIALAEKGIKYEYKEEDLLGNKSPLLLQMNPVHKKIPVLIHSDPYQRAQARFWADFVDKKIYVIGRKLWTTKGEEQETAKKDFMDALKLLEEQLGDKAYFGGDKFGFVDVAVVPFYTWFKGYEIFGNINTEKECPKFVTWAKRCLQKESVSKSLPEQEKVYDFIAERRKNIGME 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3154g00024 193 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 62 182 IPR010987 -
Gabi3154g00024 193 Pfam Glutathione S-transferase, N-terminal domain 6 61 IPR004045 -
Gabi3154g00024 193 CDD GST_C_Tau 63 183 IPR045074 GO:0004364|GO:0006749
Gabi3154g00024 193 Gene3D - 63 193 - -
Gabi3154g00024 193 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Gabi3154g00024 193 SUPERFAMILY Thioredoxin-like 4 62 IPR036249 -
Gabi3154g00024 193 FunFam Glutathione S-transferase U20 62 193 - -
Gabi3154g00024 193 Gene3D Glutaredoxin 2 62 - -
Gabi3154g00024 193 Pfam Glutathione S-transferase, C-terminal domain 98 162 - -
Gabi3154g00024 193 SUPERFAMILY GST C-terminal domain-like 56 190 IPR036282 -
Gabi3154g00024 193 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 61 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3154g00024 Gabi-Chr3154 256917 258474 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3154g00024 1 188 Glutathione S-transferase Gene Family AT1G78380 60.000 5.29e-91 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3154g00024 K00799 - gmx:547520 324.324