Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3154g00020 ATGGCGGATGAGGTGGTTCTCCTAGATTTCTGGGCAAGTCCTTTTGGGATGAGGGTTAGGATTGCACTTGCTGAAAAGGGTATCAAGTATGATTACAAAGAAGAGGACTTGAGGAACAAGAGTCCTCTTCTCCTCCAAATGAACCCGGTTCACAAGAAAATCCCGGTTCTCATCCACAATGGCAAGCCCATTTGTGAGTCTCTCATTGCTGTTCAGTACATTGATGAGGTCTGGAATGATAGATCTCCTTTGTTGCCTTCTGACCCTTACCAGAGAGCACATGCTAGATTCTGGGCTGATTTTGTTGACAAGGAGGTACCCTTTTGCGTTAATTTTTGTGATTGTTGCTTGAAGTTTTGGACAACAAAAGGAGAAGAACAAGAAGCTGCCAAGAAGGGCTTCATGGATGCCATTAAATTGTTGGAGGAACAGCTTGGAGACAAGGCTTATTTTGGAGGAGACAAGTTTGGTTTTGTGGATGTAGCAGTTATTCCATTCTACACTTGGTTCAAAGGCTATGAAATCTTTGGCAACATTGACACAGAGAAGGAGTGCCCCAAGTTTATTGCTTGGGCCAAGAGGTGCATGCAGAAAGAGAGTGTTTCCAAGTCTCTTCCTGAACAGGAAAAAGTCTATGATTTCATTGTGCAGATAAGAAAGAATATAGGCATTGAGTAG 678 0.4307 MADEVVLLDFWASPFGMRVRIALAEKGIKYDYKEEDLRNKSPLLLQMNPVHKKIPVLIHNGKPICESLIAVQYIDEVWNDRSPLLPSDPYQRAHARFWADFVDKEVPFCVNFCDCCLKFWTTKGEEQEAAKKGFMDAIKLLEEQLGDKAYFGGDKFGFVDVAVIPFYTWFKGYEIFGNIDTEKECPKFIAWAKRCMQKESVSKSLPEQEKVYDFIVQIRKNIGIE 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3154g00020 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 213 IPR045073 -
Gabi3154g00020 225 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Gabi3154g00020 225 SUPERFAMILY GST C-terminal domain-like 76 222 IPR036282 -
Gabi3154g00020 225 CDD GST_C_Tau 89 218 IPR045074 GO:0004364|GO:0006749
Gabi3154g00020 225 Gene3D - 88 225 - -
Gabi3154g00020 225 SFLD Main.3: Omega- and Tau-like 2 222 IPR045073 -
Gabi3154g00020 225 CDD GST_N_Tau 5 78 - -
Gabi3154g00020 225 Pfam Glutathione S-transferase, C-terminal domain 128 194 - -
Gabi3154g00020 225 FunFam Tau class glutathione S-transferase 1 87 - -
Gabi3154g00020 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Gabi3154g00020 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 214 IPR010987 -
Gabi3154g00020 225 FunFam Glutathione S-transferase U20 88 225 - -
Gabi3154g00020 225 Gene3D Glutaredoxin 1 87 - -
Gabi3154g00020 225 SFLD Main (cytGST) 2 222 - -
Gabi3154g00020 225 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3154g00020 Gabi-Chr3154 228503 230059 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3154g00020 1 220 Glutathione S-transferase Gene Family AT1G78380 65.000 2.27e-108 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3154g00020 K00799 - gmx:547520 378.637