Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3154g00018 ATGGGGGATGAGACCAAGGTGGTTTTGTTGGGTTCAGGGTTCAGTATGTTTGGGATGAGAGCTATGATAGCTTTGGCAGAGAAAAGAATTGAATATGAGTACATGGACCAAGATCTTACCAACAAGAGCCCTTTGCTTCTGGAAATGAACTCAATTCACAAGAAGATCCCAGTTCTCATACATCATGGGAGACCCATCTGTGAGTCCCTCATAATTGTTGAGTATATTGATATGGTTTGGAAGAACAGTGCTCCATTGCTTCCCACTGATCCCTATCAAAGAGCACAAGCCAGGTTCTGGGCTGATTTTGTAGACCGCAAGGTGTATCATGATTCAAGGAGAATATGGACTTCAAAGGGAGATGAACAAGAGGTGGCAAAGAAAGGCTTCCTAGAGAGCTTAAAGCAATTGGAGGAGGTTCTTGGAGACATGCCTTATTTTGGGGGTGACACCTTTGGGTTTGTTGATATTGCTCTCATCCCTTTCTATTGCTGGTTTTATACGTACGAGACCTTTGGCAACTTCAAAGTGGAGGCAGAGTGTCCAAAACTTATCTCATGGGCTCAGAGATGCACGAAGAAGGAGAGTGTATCTAAAACACTGGCAGATGAGAAGGAGGTTTATGAGTCTGTTTTGGATTACAAGAAGAAATTTATGGACTAA 663 0.4299 MGDETKVVLLGSGFSMFGMRAMIALAEKRIEYEYMDQDLTNKSPLLLEMNSIHKKIPVLIHHGRPICESLIIVEYIDMVWKNSAPLLPTDPYQRAQARFWADFVDRKVYHDSRRIWTSKGDEQEVAKKGFLESLKQLEEVLGDMPYFGGDTFGFVDIALIPFYCWFYTYETFGNFKVEAECPKLISWAQRCTKKESVSKTLADEKEVYESVLDYKKKFMD 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3154g00018 220 Pfam Glutathione S-transferase, N-terminal domain 13 77 IPR004045 -
Gabi3154g00018 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Gabi3154g00018 220 Gene3D Glutaredoxin 3 89 - -
Gabi3154g00018 220 Pfam Glutathione S-transferase, C-terminal domain 126 190 - -
Gabi3154g00018 220 SFLD Main (cytGST) 4 219 - -
Gabi3154g00018 220 SUPERFAMILY Thioredoxin-like 6 109 IPR036249 -
Gabi3154g00018 220 CDD GST_C_Tau 91 214 IPR045074 GO:0004364|GO:0006749
Gabi3154g00018 220 Gene3D - 90 219 - -
Gabi3154g00018 220 SUPERFAMILY GST C-terminal domain-like 80 217 IPR036282 -
Gabi3154g00018 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 218 IPR010987 -
Gabi3154g00018 220 FunFam Glutathione S-transferase U20 90 220 - -
Gabi3154g00018 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 208 IPR045073 -
Gabi3154g00018 220 FunFam Tau class glutathione S-transferase 1 89 - -
Gabi3154g00018 220 CDD GST_N_Tau 7 80 - -
Gabi3154g00018 220 SFLD Main.3: Omega- and Tau-like 4 219 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3154g00018 Gabi-Chr3154 205369 206764 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3154g00018 1 218 Glutathione S-transferase Gene Family AT1G17180 60.550 3.09e-98 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3154g00018 K00799 - gmx:548030 377.096