Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3154g00013 ATGGCAGATGAAGTGATTCTGTTGAATTTCTGGCTAAGCCCTTATGGTATGAGGGTCCAGATTGCACTAGAGGAAAAGGGCATCAAGTATGAGTACAAAGAAGAGGACATGAGCAACAAGAGCCCTTTACTCCTACAAATGAACCCAATTCATAAGAAAATACCAGTTCTCATCCACAATGGAAAACCCATTTGTGAGTCACTTCTTGCTGTTGAGTATATTGATGAGGTTTGGAAAGACCAATCTCCATTGTTGCCTTCTGATCCTCACCAGAGAGCCCAAGCTAGATTCTGGGCTAACTACATTGACAACAAGGTATATGAGGTTGCCTTGAAGTTATGGAAAACTAAAGGAGAAGAGAAAGAAGCTGCCATGAAAGAATTGTTAGAATGTCTTAAATTGTTGGAAGAAAAGCTGGGAGACAAGCTTTATTTTGGTGGAGACAAATTTGGACTTGTGGATGTGGCACTTGTTCCTTTGTTCTGTTGGTTGTATACTTATAATTTCTCTGCCATTTTAATCAGTGAAGCTGAGTACCCTAATATCATTGCTTGGGCCAAGAGGTGCACCCAAAGAGAGAGTGTGTCCAAGTCTTTTCCTGAGGAGCACAGGGTCAAAAGTTTTTTAGCAGAGAAAGGACTTGGACAGTGA 651 0.4117 MADEVILLNFWLSPYGMRVQIALEEKGIKYEYKEEDMSNKSPLLLQMNPIHKKIPVLIHNGKPICESLLAVEYIDEVWKDQSPLLPSDPHQRAQARFWANYIDNKVYEVALKLWKTKGEEKEAAMKELLECLKLLEEKLGDKLYFGGDKFGLVDVALVPLFCWLYTYNFSAILISEAEYPNIIAWAKRCTQRESVSKSFPEEHRVKSFLAEKGLGQ 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3154g00013 216 CDD GST_C_Tau 89 209 IPR045074 GO:0004364|GO:0006749
Gabi3154g00013 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Gabi3154g00013 216 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Gabi3154g00013 216 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Gabi3154g00013 216 FunFam Tau class glutathione S-transferase 1 87 - -
Gabi3154g00013 216 CDD GST_N_Tau 5 78 - -
Gabi3154g00013 216 Pfam Glutathione S-transferase, C-terminal domain 115 193 IPR004046 -
Gabi3154g00013 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Gabi3154g00013 216 SFLD Glutathione Transferase (cytosolic) 2 210 IPR040079 -
Gabi3154g00013 216 Gene3D Glutaredoxin 1 87 - -
Gabi3154g00013 216 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 205 IPR045073 -
Gabi3154g00013 216 Gene3D - 88 213 - -
Gabi3154g00013 216 Coils Coil 118 138 - -
Gabi3154g00013 216 SFLD Main.3: Omega- and Tau-like 2 210 IPR045073 -
Gabi3154g00013 216 SUPERFAMILY GST C-terminal domain-like 76 208 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3154g00013 Gabi-Chr3154 171389 172332 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3154g00013 1 211 Glutathione S-transferase Gene Family AT1G78380 60.190 6.63e-96 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3154g00013 K00799 - gmx:100776076 302.367