Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3154g00012 ATGGGTGACGAGGTTGTTTTGTTGGATACATGGGCCAGCATGTTTGGGATGAGGGCTAGGATTTCATTGGCTGAAAAGGGTGTTAGGTATGAGTACAAGGAAGAGAATTTTTTCATTGGCAAGAGTACTTTGCTTTTGCAGATGAACCCAATTCACAAGAAAGTACCAGTTCTCATTCATAATGGAAAACCCATATGTGAATCTGCTATTATTGTTCAGTACATAGATGAGGTTTGGAATCACAAATTTTCACTCATGCCCTCTGACCCTTACCAGAAAGCTCAAGCAAGATTCTGGGTTGATTACATTGACAAAAATGTGTATGATACTTGGAGGAAAATGTGGCTTTCTAAAGGAGAGGAGCATGAGGCAGGGAAGAATGAGTTGATCTCAATCTTTAAACAACTTGAGGAGACACTTGGGGATAAAGCTTTTTATGGGGGTGACACTTTTGGGTTTGTTGATGTTGGTCTCATCCCTTTCTATAGCTGGTTTTATACTTTTGAGACGTTTGGTAACTTCAAAATGGAAGCAGAGTGTCCTAGTTTGATGGCTTGGGTCAAGAGATGCATGCAGAGAGAGGCTGTGTCCAAAACTCTTCCTGATGAGAAGAAGGTGTATGATTTGGTTTTGGCCGTTCAGAAAGCACTTGGACTGGAATAA 663 0.4103 MGDEVVLLDTWASMFGMRARISLAEKGVRYEYKEENFFIGKSTLLLQMNPIHKKVPVLIHNGKPICESAIIVQYIDEVWNHKFSLMPSDPYQKAQARFWVDYIDKNVYDTWRKMWLSKGEEHEAGKNELISIFKQLEETLGDKAFYGGDTFGFVDVGLIPFYSWFYTFETFGNFKMEAECPSLMAWVKRCMQREAVSKTLPDEKKVYDLVLAVQKALGLE 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3154g00012 220 Gene3D Glutaredoxin 1 88 - -
Gabi3154g00012 220 FunFam Tau class glutathione S-transferase 1 88 - -
Gabi3154g00012 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 209 IPR010987 -
Gabi3154g00012 220 SFLD Glutathione Transferase (cytosolic) 3 217 IPR040079 -
Gabi3154g00012 220 SFLD Main.3: Omega- and Tau-like 3 217 IPR045073 -
Gabi3154g00012 220 FunFam Glutathione S-transferase U20 89 220 - -
Gabi3154g00012 220 Pfam Glutathione S-transferase, C-terminal domain 121 194 IPR004046 -
Gabi3154g00012 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 207 IPR045073 -
Gabi3154g00012 220 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Gabi3154g00012 220 CDD GST_C_Tau 90 212 IPR045074 GO:0004364|GO:0006749
Gabi3154g00012 220 CDD GST_N_Tau 5 79 - -
Gabi3154g00012 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Gabi3154g00012 220 Pfam Glutathione S-transferase, N-terminal domain 7 77 IPR004045 -
Gabi3154g00012 220 Gene3D - 89 220 - -
Gabi3154g00012 220 SUPERFAMILY GST C-terminal domain-like 77 214 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3154g00012 Gabi-Chr3154 168092 169240 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3154g00012 1 220 Glutathione S-transferase Gene Family AT1G17180 60.000 1.06e-102 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3154g00012 K00799 - gmx:547950 383.645