Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3154g00010 ATGGGTGACGAGGTTGTTTTGTTGGATACATGGGCCAGCATGTTTGGGATGAGGGTTAGGATTGCATTGGCTGAAAAGGGTGTTAAGTATGAGTACAAGGAAGAGAATCTTCCAATTAGCAAGAGCCCTTTGCTTCTGCAAATGAACCCAGTTCACAAGAAAATCCCAGTTCTTATCCATAATGGAAAACCCATATGTGAATCTGCTATTATTGTTCAGTACATAGATGAGGTTTGGAATCACAATCCTTCACTCATGCCCTCTGACCCTTACCAGAAAGCTCAAGCAAGATTCTGGTTTGATTACATTGACAAAAAGGTTTATGATACTTGGAGGAAAATGTGGCTTTCTAAAGGAGAGGAGCATGAGGCAGGGAAGAATGAGTTGATCTCAATCTTTAAACAACTTGAGGAGACACTTGGTGACAAACCTTTTCATGGGGGTGACACTTTTGGGTTTGTTGATGTTGGTCTCATCCCTTTCTATAGCTGGTTTTATACTTTTGAGACGTTTGGTAACTTCAAAATGGAAGCAGAGTGTCCTAGTTTGATGGCTTGGGTCAAGAGATGCATGCAGAGAGAGGCTGTGTCCAAAACTCTTCCTGATGGGAAGAAGGTGTATGATTTTGTTGTGGCCGTTCAGAAAGCACTTGGATTGGAATAA 663 0.4178 MGDEVVLLDTWASMFGMRVRIALAEKGVKYEYKEENLPISKSPLLLQMNPVHKKIPVLIHNGKPICESAIIVQYIDEVWNHNPSLMPSDPYQKAQARFWFDYIDKKVYDTWRKMWLSKGEEHEAGKNELISIFKQLEETLGDKPFHGGDTFGFVDVGLIPFYSWFYTFETFGNFKMEAECPSLMAWVKRCMQREAVSKTLPDGKKVYDFVVAVQKALGLE 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3154g00010 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 209 IPR010987 -
Gabi3154g00010 220 SFLD Main.3: Omega- and Tau-like 3 217 IPR045073 -
Gabi3154g00010 220 Gene3D - 89 220 - -
Gabi3154g00010 220 Pfam Glutathione S-transferase, N-terminal domain 7 77 IPR004045 -
Gabi3154g00010 220 FunFam Tau class glutathione S-transferase 1 88 - -
Gabi3154g00010 220 FunFam Glutathione S-transferase U20 89 220 - -
Gabi3154g00010 220 Pfam Glutathione S-transferase, C-terminal domain 124 189 - -
Gabi3154g00010 220 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Gabi3154g00010 220 CDD GST_C_Tau 90 212 IPR045074 GO:0004364|GO:0006749
Gabi3154g00010 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 208 IPR045073 -
Gabi3154g00010 220 CDD GST_N_Tau 5 79 - -
Gabi3154g00010 220 SFLD Glutathione Transferase (cytosolic) 3 217 IPR040079 -
Gabi3154g00010 220 Gene3D Glutaredoxin 1 88 - -
Gabi3154g00010 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Gabi3154g00010 220 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3154g00010 Gabi-Chr3154 149071 150333 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3154g00010 1 220 Glutathione S-transferase Gene Family AT1G17180 63.182 5.74e-105 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3154g00010 K00799 - gmx:547950 386.726