Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3154g00007 ATGGACGAATCCACATTCTTCTTCCCACCTGATTCAGACCTTGACCTCAGTTTCACAAGCACCACCACCGATCGCACCTTCACCTCTTCTAGTGCTCGCACCAGCTTAGCCCGCACTAGCAGCTTAACCCTAACCCTCAGCTTCAACGATCGCCTCTCCACCGCCTCTGCCACCGCATACTCTACCGTCAACCGCCGTCCACACCGAAGCTCCGATCCTCACTGGTCCGCCATCAAGGCCGCCACCAACCTCTCCTCCGACGGCCGCCTCCACCTCCGTCACCTCAAACTCCTCCGCCACCTCGGCTCCGGCAACCTCGGCCGCGTTTTCCTCTGCCGCCTCCGCGACTACGACGGCGCCAACTTCGCCCTCAAGGTCGTCGACAAAGACCTCCTCACCGCCAAGAAGCTCTCCCACGCGGAAACCGAGGCAGATATCCTCCACGCGCTCGACCACCCGTTCCTCCCCACTCTCTACGCGCGCATCGACGTCTCCCACTACACGTGCCTCCTCATCGACTACTGCCCCGGCGGCGACCTCCACACCCTCCTACACAAACAACCAAACAACCGCCTATCTCTCTCGGCGGCGAAATTCTTCGCCGCCGAGATCCTCGTGGCGCTCGAGTACCTCCACGCTCTCGGCATTGTTTACCGCGACTTGAAACCGGAGAACGTTCTGTTACGCGAGGACGGCCACGTCATGCTCTCTGATTTCGACCTGTGCTTCAAATCCGACGTGGCACCCACGTTTGAATCTCGGGCCCACGAGCCCCACGTGAGGCCCACAGTTAGTTGTTTCAGTTGTAACAAACGGAGAAAATCTTCTCATACGGTTGCGGAGTTTGTTGCAGAGCCAACGACGGCGTTTTCTAGGTCGTGTGTTGGGACCCACGAGTACTTGGCGCCGGAGCTTGTCTCGGGTAACGGTCACGGTAACGGCGTGGATTGGTGGGCTTTTGGAGTTTTCATTTACGAGTTGCTTTACGGAACGACGCCGTTCAAGGGGTATAGCAAGGAGAGCACCCTGCGCAATATAGCGTCGAGCAAGGATGTGAAGTTCCACGTGGCAGAAAAGGAAGAGGCAGGGATGGTGGAGGCACGTGACTTGATAGAGAAGTTGTTGGTGAAGGACCCTAGAAGAAGGTTAGGGTGCGCTAGGGGTGCCACAGATCTTAAACGACACCCGTTTTTTGATGGGATCAAATGGCCCTTGATTCGGACCTATAGGCCACCAGAGGTGAAGGGGTTATTGAGGAAGAATAAATCAAATGTGGGTCACGTGACCTATAAGAGGAGGAGATGGTGGTGGAAAGGACTGGAGTATGTCATGAGGAAAAGAGGAGCTAAACATAATTTATTTTCAAACTACAGTAATAGTAATTATTATCATTATATCAATAATAATAAGATTAGGTAA 1419 0.5447 MDESTFFFPPDSDLDLSFTSTTTDRTFTSSSARTSLARTSSLTLTLSFNDRLSTASATAYSTVNRRPHRSSDPHWSAIKAATNLSSDGRLHLRHLKLLRHLGSGNLGRVFLCRLRDYDGANFALKVVDKDLLTAKKLSHAETEADILHALDHPFLPTLYARIDVSHYTCLLIDYCPGGDLHTLLHKQPNNRLSLSAAKFFAAEILVALEYLHALGIVYRDLKPENVLLREDGHVMLSDFDLCFKSDVAPTFESRAHEPHVRPTVSCFSCNKRRKSSHTVAEFVAEPTTAFSRSCVGTHEYLAPELVSGNGHGNGVDWWAFGVFIYELLYGTTPFKGYSKESTLRNIASSKDVKFHVAEKEEAGMVEARDLIEKLLVKDPRRRLGCARGATDLKRHPFFDGIKWPLIRTYRPPEVKGLLRKNKSNVGHVTYKRRRWWWKGLEYVMRKRGAKHNLFSNYSNSNYYHYINNNKIR 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3154g00007 472 Gene3D Transferase(Phosphotransferase) domain 1 179 245 - -
Gabi3154g00007 472 ProSiteProfiles Protein kinase domain profile. 95 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3154g00007 472 CDD STKc_phototropin_like 102 414 - -
Gabi3154g00007 472 Gene3D Phosphorylase Kinase; domain 1 94 178 - -
Gabi3154g00007 472 Gene3D Transferase(Phosphotransferase) domain 1 291 412 - -
Gabi3154g00007 472 SMART serkin_6 95 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3154g00007 472 PANTHER FLIPPASE KINASE 1-RELATED 34 416 - -
Gabi3154g00007 472 FunFam Serine/threonine-protein kinase OXI1 289 416 - -
Gabi3154g00007 472 FunFam Serine/threonine-protein kinase OXI1 179 246 - -
Gabi3154g00007 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Gabi3154g00007 472 Pfam Protein kinase domain 97 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3154g00007 472 SUPERFAMILY Protein kinase-like (PK-like) 71 414 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3154g00007 Gabi-Chr3154 78219 79637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3154g00007 1 469 AGC Kinase Gene Family AT3G14370 65.779 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gabi3154g00007 Pkinase 1e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3154g00007 - - lja:Lj0g3v0200189.1 708.368