Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3154g00006 ATGGAGGATAATCAATGGCATCTCTATGACCATGACCCTCTTCTTCTCACAGACGTTTCTTTGCAACAAGATTCTTCTTCTTCCACTTCTCATTGTTCCAATTACATTTCTTCACAAACATCACCGAGCTCTCGGAGTTCGGCTATGGCGGCGGAACCTCAAACTCATGGTGGCAGCCCAAGTTACGGATTTTCTCGGAAAAATAGAAGCTTTCAAGGGAACAGCGTGCATTTTGATGACCCAGTTGTGAAAAATGTGTTTGATGGAAGATCAATGTTGGGGTACTCTTTGACTTCCCCAGATTTCGTCATTTGTGCTGGGTCACCAGATATTGCTGGAATCAGCTATGGTGATTCCCCTGAGATGTTGAAGAGCAAACAATGCAAGAATTTGGAGTCATCTATGGAGCTTTCTCTTGAGAATGGAATCAATGGTTCTGAAGTTGATGTTGACAATGTTCATAAGACCCCAACAGTTAAATTCTCTGATTTGTGTCAAACTTTTGAACATGGGGAAGAGATGCTATCCCCTGAAGCCTCCTTCGAGCTTCTTCCACCCCCGGTTACCAAGGATGAGTCTCCCCAAGACTACCCTCTTAGAGATAATGAAATGCTAGAAGATATTGGAGTGTCTCAGGAAGCAGAATTGGAGTCCTCAGAAGTTGTGAAGGATATTGGGGTGGAAGAGAAGTTTCAGAAGCTGAAGATAGATTTTAAGAGTCAGAGAAAGGAGCTAGAAGAAACAAGGAGGGAGTTGGGGGAGATTAAGAGGGAGAAACAACAGAAGAGTAGAGAATGCCAAGAAGCTTGGAACTCCTTGAAAGAGCTTCAGAATGAGCTAATGCGCAAGTCCATGCACGTAGGGTCTTTAGCATTTGCCATTGAGGGGCAAGTGAAAGAGAAAAGCAAGTGGTTTTCATCACTGAGAGACTTGATGAGGAAATTGAAGATAATGAAAATGGAACACATCAAGCTATTAGAGGAAGCAGAGGCAAACAAGAAATATCAAGCAGATATGAGTGAAGTGGAGCTTATTATCAAGTCCAAAATGAATGAAGAACTGGAATCACATAATGATCTCAAGTCCAAGTATATTGAAATGGCTAAGGAAAGAAAAGAGCTTTACAATAAGGTTTTGGAGTTAAGAGGAAACATAAGGGTCTTTTGCCGGTGTAGGCCTCTCAATGCTGAAGAGATAACAGCAGGAGCCACAATGGCATTAGATTTTGAATCTGCTAAAGATGGTGAGCTTACTGTAATGTCAAATGGAGCTCCCAGAAAGACTTTTAAGTTTGATGCTGTGTTTGGTCCCCAAGCTGAACAAGCTGATATTTTTGAAGACACAGCCCCATTTGCAACCTCAGTTCTAGATGGATACAATGTATGCATTTTTGCATATGGCCAGACTGGGACAGGTAAAACTTTCACAATGGAGGGCACAGAAGAGGCTCGTGGAGTTAATTTCAGGACTCTTGAGAAAATGTTTCACATAATCAAGGAGAGACAGAAACTCTATCGTTATGATGTCTCTGTAAGTGTGTTAGAAGTGTACAATGAGCAAATAAGAGATTTGCTAGGAAATCAACCAGGAATAGCTGCAAAAAGACTTGAAATAAGGCAAGCTGGTGAAGGAATGCATCACATTCCAGGGTTGGTTGAGGCTAATGTGAACAACATGACTGAAGTCTGGGAAGTCCTACAAACTGGTAGTAATGCAAGGGCTGTAAGCTCAACCAATGCCAATGAGCATAGCAGCAGATCTCACTGCATTCACTGTGTTATGGTGAAGGGGGAGAATTTGTTGAATGGGGAATACACGAGAAGCAAATTGTGGCTGGTGGACCTAGCAGGCAGTGAGCGTGTGGCAAAGACAGAAGTGCAAGGTGATAGACTGAAGGAGACACAAAATATTAATAGGTCTCTATCTGCACTTGGTGATGTCATATCAGCTCTTGCAACAAAAAGTTCACACATCCCTTTCAGGAACTCCAAGCTTACACACTTGCTGCAAGACTCATTAGGAGGAGATTCAAAGGCACTCATGTTTGTACAGATCAGTCCTAATGAAAACGATTTGAGTGAGACAATTTGCTCTCTGAACTTTGCTAGTAGAGTGAGGGGAATAGAACTGGGACCTGCAAAAAAGCAGTTGGACACTACTGAACTTCTGAAACACAAACAGATGGCTGAGAAAACCAAACATGAGGTAAAGCTGAAGGATTTTCAAATCAAGAAGATGGAGGAAACAATCCATGGATTAGAGTCCAAGATGAAGGAAAGAGATAATAAAAACAAAAATCTGCAAGACAAGGTCAAGGAACTGGAATCACAACTTATGATTGAGAGAAAACTAGCACGTCAACATGTAGACTCAAAGATAGCTGAGCAGCATCAGATGAAACATCAAGAGGAGCAAAACAATGCACTTACAAAACCAGCACTTGCAAATCGACCACTAGGAAGTCTCAAGCATTTTAATGATCCAGTGAGTGGTGGTTTGTGCAAAGACCAACTAAATTCTACTAGACCTCTTACGGAGAACAACATCTTAAAACCTTTTATACCCTTTTCAACAATGGAGAGCTCCATCAAATACATTGATCAAACTGAGAAAGAAAACAATCCTGACATGGCTGAAAAAGCACTACTGCCAAAAAGGAGCGGAAGAGCTTCTATATGCACCATGACACCACGTGTCCCTTCAGCCATTGCTTCAAGGCGCAGCTCTTTGATTCCACTCCCAAGTGTACCTAGCTTAACACAGCTCCCATCACCATTATTACCCAAGTTAACAAACCAAGCTGATCAGAATGATGTCAATGGGGAATCAGAAACTAGCTTTTTGCCTACACAGACTCATTGTGAGAGTCCCAAAGAAGTAAGAAGTGGTGTTAAGAAGAGCTTACTAAGAAGAAGCTTGCATAAGAAAATAGTAAAATCTCCACTGCAACAACATATGAGAAAGGTTGGTGTAAATGTAGGGATGGAGAAAGTTAGAGTTTCCATTGGAAGTAGAGGGAGATTGGCACAAAGGGTGCAACTAGGAAGTGGTAGAAGAGGTGGAGCTAAAGACATCCAACAAAAGAACAGTCACAAGGAAAAGGAAAGGGGATGGATCTGA 3120 0.4183 MEDNQWHLYDHDPLLLTDVSLQQDSSSSTSHCSNYISSQTSPSSRSSAMAAEPQTHGGSPSYGFSRKNRSFQGNSVHFDDPVVKNVFDGRSMLGYSLTSPDFVICAGSPDIAGISYGDSPEMLKSKQCKNLESSMELSLENGINGSEVDVDNVHKTPTVKFSDLCQTFEHGEEMLSPEASFELLPPPVTKDESPQDYPLRDNEMLEDIGVSQEAELESSEVVKDIGVEEKFQKLKIDFKSQRKELEETRRELGEIKREKQQKSRECQEAWNSLKELQNELMRKSMHVGSLAFAIEGQVKEKSKWFSSLRDLMRKLKIMKMEHIKLLEEAEANKKYQADMSEVELIIKSKMNEELESHNDLKSKYIEMAKERKELYNKVLELRGNIRVFCRCRPLNAEEITAGATMALDFESAKDGELTVMSNGAPRKTFKFDAVFGPQAEQADIFEDTAPFATSVLDGYNVCIFAYGQTGTGKTFTMEGTEEARGVNFRTLEKMFHIIKERQKLYRYDVSVSVLEVYNEQIRDLLGNQPGIAAKRLEIRQAGEGMHHIPGLVEANVNNMTEVWEVLQTGSNARAVSSTNANEHSSRSHCIHCVMVKGENLLNGEYTRSKLWLVDLAGSERVAKTEVQGDRLKETQNINRSLSALGDVISALATKSSHIPFRNSKLTHLLQDSLGGDSKALMFVQISPNENDLSETICSLNFASRVRGIELGPAKKQLDTTELLKHKQMAEKTKHEVKLKDFQIKKMEETIHGLESKMKERDNKNKNLQDKVKELESQLMIERKLARQHVDSKIAEQHQMKHQEEQNNALTKPALANRPLGSLKHFNDPVSGGLCKDQLNSTRPLTENNILKPFIPFSTMESSIKYIDQTEKENNPDMAEKALLPKRSGRASICTMTPRVPSAIASRRSSLIPLPSVPSLTQLPSPLLPKLTNQADQNDVNGESETSFLPTQTHCESPKEVRSGVKKSLLRRSLHKKIVKSPLQQHMRKVGVNVGMEKVRVSIGSRGRLAQRVQLGSGRRGGAKDIQQKNSHKEKERGWI 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3154g00006 1039 PANTHER KINESIN-LIKE PROTEIN KLP-3 207 900 IPR027640 GO:0003777|GO:0007018
Gabi3154g00006 1039 Coils Coil 743 784 - -
Gabi3154g00006 1039 Coils Coil 231 279 - -
Gabi3154g00006 1039 MobiDBLite consensus disorder prediction 1024 1039 - -
Gabi3154g00006 1039 Coils Coil 308 332 - -
Gabi3154g00006 1039 MobiDBLite consensus disorder prediction 27 66 - -
Gabi3154g00006 1039 MobiDBLite consensus disorder prediction 924 957 - -
Gabi3154g00006 1039 Gene3D Kinesin motor domain 326 710 IPR036961 -
Gabi3154g00006 1039 CDD KISc_C_terminal 382 710 - -
Gabi3154g00006 1039 SMART kinesin_4 382 716 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3154g00006 1039 PRINTS Kinesin heavy chain signature 458 479 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3154g00006 1039 PRINTS Kinesin heavy chain signature 609 627 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3154g00006 1039 PRINTS Kinesin heavy chain signature 658 679 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3154g00006 1039 PRINTS Kinesin heavy chain signature 578 595 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3154g00006 1039 FunFam kinesin-like protein KIN-14R 329 710 - -
Gabi3154g00006 1039 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 384 746 IPR027417 -
Gabi3154g00006 1039 ProSiteProfiles Kinesin motor domain profile. 384 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3154g00006 1039 MobiDBLite consensus disorder prediction 924 968 - -
Gabi3154g00006 1039 ProSitePatterns Kinesin motor domain signature. 608 619 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gabi3154g00006 1039 Pfam Kinesin motor domain 390 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3154g00006 1039 MobiDBLite consensus disorder prediction 1009 1039 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3154g00006 Gabi-Chr3154 52719 59255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3154g00006 371 735 Calmodulin-binding Proteins AT5G65930 43.478 3.26e-80 284