Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3151g00048 ATGGAGGAAAACCCTAGTTCATCAAGAACTGATAGAAAATTCATTGAGAGGAATAGAAGAAATCAAATGAAGGCTCTCTACTCCAAGCTCTATTCACTTGTGCCTCATCAAAGCTCAATGGAGGCTAATTCGCTGCAAGATCAGATAGGAGAAGCCACAAGCTACATAAAGAATTTACAGATGAAGTTGGAAAAATTGAAGGAGAAGAAGAACAAACTAATAGGAATTGACAGGTCAAAATATCCACAATTTGAGATCCAACAAACTTGTTCAACCTTAGAGGTTGTTCTAATAACTGGATTGGATTGTCAATTCATGTTCAATGCTACCATTCGTGTTCTTCATGAAGAAGGATTAGATATTGTTAATGCCAGTTATGCAGTTGTTGAAGATACAGTTTTCCATACAATACACTGTCAGGTAGGGGAATCTGCCAATGGAGCTGCGAGGATATCTGAGAAACTAAGGAAATTTTAG 477 0.3732 MEENPSSSRTDRKFIERNRRNQMKALYSKLYSLVPHQSSMEANSLQDQIGEATSYIKNLQMKLEKLKEKKNKLIGIDRSKYPQFEIQQTCSTLEVVLITGLDCQFMFNATIRVLHEEGLDIVNASYAVVEDTVFHTIHCQVGESANGAARISEKLRKF 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3151g00048 158 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 8 156 - -
Gabi3151g00048 158 FunFam Transcription factor bHLH162 1 85 - -
Gabi3151g00048 158 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 73 IPR036638 GO:0046983
Gabi3151g00048 158 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 7 59 IPR011598 GO:0046983
Gabi3151g00048 158 Coils Coil 49 76 - -
Gabi3151g00048 158 Gene3D - 1 91 IPR036638 GO:0046983
Gabi3151g00048 158 Pfam Helix-loop-helix DNA-binding domain 9 60 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3151g00048 Gabi-Chr3151 462271 462954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3151g00048 5 158 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 43.169 2.52e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gabi3151g00048 HLH 1.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3151g00048 - - gmx:100810793 210.305