Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3151g00036 ATGGACAGCTTTTATGCTCAGTTTTCTGCAACAAACACAAACCCATCAACCACAACCATGGCCACAACCAACAGTACTTTCTCATCCTCATCCTCATCCTCATACTCATACTCAAACGTAAGCCTTGCAGCAGAACAAAACATGTTTCATCCACAGAATGTAGTTCACTTCCCCAATAATAGTGAAACACTTGGATTTCCTGCAACTCCCTTTCCCCAACCAGTTACACAGTTCAGCTTTCAATCACCTTATTTCGTACCATATGAATTACAAAACATGCAGTTCCCATCTACACAAACGTTTACCCAAGTGAATCATCATTTTTCCAATCCTTTGCATTCTTTTCCAATGGAGGAAAGTAATGAAGTCCTTTTAAGAATGCAAAACTGTCGTAGAGAAGGTAGGAAGATAATGGAAGCATCTATACGGAGAGAAGCAAGGGAAAGAAGAAAACAAGCAAGACAACAAAGGAGTGGAAGTTCTGCTCCTCCTGCTGTGGCACCTTCAGTAAGTACTGAAGGAACAATAAGGGGACAACAACCTCTTACTAGTGGAGAGTCAAATGATAAGGTGACAGTCACCCAAAACAGAAATCCCAATGTTTTTTGTGCTCCAGATGGGAAGAGGCTTGAAGAAATTTTGACAAAGAAGTTACAAAACAGTGACGTAAGCTGCCTAGGCCGTATTATCCTCCCTAAGAGGGAGGCTGAGGCAAAGCTTCCGGACCTGAGCAACAAGGAAGGAATCGATATTCTACTAAGGGATGTATATTCTGACCTACCATGGACTTTGAGATACAGGTTCTGGTGTAATAACAAAAGTAGAATGTATGTTCTCGAAAATGCAGGAGATTTTGTGAACCATTATGGATTACAAAATGGAGATTCTCTAACCCTTTACGAGGACGAATCAAAAAATCTGTATGTGTCAACAAAAAAGGAGCGAAATCAAGAAGTGCTCGAGCCCTCAACAAACAAGCAAAGGCTGCAAATACATGGCACATACAACTATAGCTACACGCAAAGCAACGATGAAGATGAAGCATCGTTGGCTTTATTGATAGAAGAGCTTAGCAACAAGAGGGAAGAAGAAGCTGCTAACAGCCTGTTGACACTGTGCAGTGGTGGTGGTGGTGGTGGTCCTTCAAGTGGAACTGAATACGTTAAACTACCCAACTATGTTACAGGAGGGTCATCAAGCCAAATAGCTGAACAACCAAACATAGAAGCCGCAGCACCATCCTCCAAGGGCAAGACCAAAGTACTGATATGTGATGATCAACAGAACAGCATCGATGATGTCTACGGGGGTCTTGACAATATTTTAGATGTTGGTCATTTAACAGATTACAAGAAATGGACCATGTAA 1368 0.4174 MDSFYAQFSATNTNPSTTTMATTNSTFSSSSSSSYSYSNVSLAAEQNMFHPQNVVHFPNNSETLGFPATPFPQPVTQFSFQSPYFVPYELQNMQFPSTQTFTQVNHHFSNPLHSFPMEESNEVLLRMQNCRREGRKIMEASIRREARERRKQARQQRSGSSAPPAVAPSVSTEGTIRGQQPLTSGESNDKVTVTQNRNPNVFCAPDGKRLEEILTKKLQNSDVSCLGRIILPKREAEAKLPDLSNKEGIDILLRDVYSDLPWTLRYRFWCNNKSRMYVLENAGDFVNHYGLQNGDSLTLYEDESKNLYVSTKKERNQEVLEPSTNKQRLQIHGTYNYSYTQSNDEDEASLALLIEELSNKREEEAANSLLTLCSGGGGGGPSSGTEYVKLPNYVTGGSSSQIAEQPNIEAAAPSSKGKTKVLICDDQQNSIDDVYGGLDNILDVGHLTDYKKWTM 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3151g00036 455 ProSiteProfiles B3 DNA-binding domain profile. 214 315 IPR003340 GO:0003677
Gabi3151g00036 455 Pfam B3 DNA binding domain 215 311 IPR003340 GO:0003677
Gabi3151g00036 455 Coils Coil 343 363 - -
Gabi3151g00036 455 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 142 345 IPR044800 GO:0003700
Gabi3151g00036 455 MobiDBLite consensus disorder prediction 156 198 - -
Gabi3151g00036 455 CDD B3_DNA 213 309 IPR003340 GO:0003677
Gabi3151g00036 455 SMART B3_2 214 315 IPR003340 GO:0003677
Gabi3151g00036 455 SUPERFAMILY DNA-binding pseudobarrel domain 213 310 IPR015300 -
Gabi3151g00036 455 Gene3D - 203 322 IPR015300 -
Gabi3151g00036 455 MobiDBLite consensus disorder prediction 145 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3151g00036 Gabi-Chr3151 346327 350069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3151g00036 206 359 B3 DNA Binding Superfamily AT1G28300 50.000 8.03e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gabi3151g00036 B3 1e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3151g00036 K09287 - gmx:102662409 234.187