Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3151g00030 ATGGTCTTGTTCTCCTTAACCGTCTTCTGGATCTCTCTTTCTTTCTCTGAACTAATGGACCCAAACAGGTCAGAGAGAAAGAGAACATTGAGGTACAAAGAAGAGAATGATGAGGGAGCAGAGGAAGAGGAAGAGGTTAACGAGATGGATTTCGAAGAAGATGGAAGGAGGAAGAGAGTGGTGAAAAATCCCTATAGCAAGAGAGGGTCTAAAGCTGGAGGCTCAATGTTACCTTCTTGTCAGGTAGATAGTTGTGATGCTGATTTAAGCGAAGGTAAGCAGTATCACCGAAGACATAAGGTTTGTGTGTACCATGCCAAGTCTCCATCCGTACACATTGCAGGACAGATGCAAAGGTTTTGCCAGCAACGTAGCAGATTTCATGAGCTTTCAGAATTTGATGACTCAAAAAGGAGTTGTAGAAGGCGTTTGGCTGGGCATAACGAGAGGCGTCGCAAAAGTACATTTGACTATCATGGAGAATGA 486 0.4383 MVLFSLTVFWISLSFSELMDPNRSERKRTLRYKEENDEGAEEEEEVNEMDFEEDGRRKRVVKNPYSKRGSKAGGSMLPSCQVDSCDADLSEGKQYHRRHKVCVYHAKSPSVHIAGQMQRFCQQRSRFHELSEFDDSKRSCRRRLAGHNERRRKSTFDYHGE 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3151g00030 161 FunFam Squamosa promoter-binding-like protein 14 71 141 - -
Gabi3151g00030 161 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 62 154 IPR044817 GO:0003677
Gabi3151g00030 161 Gene3D - 70 141 IPR036893 GO:0003677|GO:0005634
Gabi3151g00030 161 ProSiteProfiles Zinc finger SBP-type profile. 77 154 IPR004333 GO:0003677
Gabi3151g00030 161 SUPERFAMILY SBT domain 78 158 IPR036893 GO:0003677|GO:0005634
Gabi3151g00030 161 MobiDBLite consensus disorder prediction 30 77 - -
Gabi3151g00030 161 Pfam SBP domain 80 153 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3151g00030 Gabi-Chr3151 277482 279850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3151g00030 80 157 SBP-box Gene Family AT2G33810 75.641 1.84e-39 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Gabi3151g00030 SBP 2.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3151g00030 - - gmx:100527199 198.749