Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3151g00023 ATGCATGACGAAGACGACGACGATAATGAAAATATCGCAATGGAAGAACGTCTTCTAGCAAGACTAAAGAAGAGATTATCAATGCTGAGTATTGGAATTTCAGGTTTAGAGGGACACCATTATACATGTCACCAGAATCAGTTAAGGGTCAGATTAACATCATTGGATATATGGTCTCTTGGATGTATAGTCATAGAGATGATCACTGGGTTAAATATATGTAGGAACCCTCTAACTTCAAAGGAGATGATTCCAACTACAAATGATATGATGTACAAGCTTGTTGTCCTTAAAGAAGCACCGAAGATACCTAATGGAGTAAGTGAGGATTGCAGAGATTTCTTGAGCAAAGGTTTCATCAAGAATCCTAGTCAGAGATGGATTGCTAGCAAGCTTCTCCACCGTCCTTTTCTATTTTCTCCATGTGATTCTTTTGGAGGTTATGAAAGATTTCATATGGTTAATCTGTCGTCCTCATTTTTCACTTATGATCGTAATTGGTTATCATTTAAGGCATAA 519 0.3719 MHDEDDDDNENIAMEERLLARLKKRLSMLSIGISGLEGHHYTCHQNQLRVRLTSLDIWSLGCIVIEMITGLNICRNPLTSKEMIPTTNDMMYKLVVLKEAPKIPNGVSEDCRDFLSKGFIKNPSQRWIASKLLHRPFLFSPCDSFGGYERFHMVNLSSSFFTYDRNWLSFKA 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3151g00023 172 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 53 140 - -
Gabi3151g00023 172 Pfam Protein kinase domain 53 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3151g00023 172 Gene3D Transferase(Phosphotransferase) domain 1 35 145 - -
Gabi3151g00023 172 SUPERFAMILY Protein kinase-like (PK-like) 54 142 IPR011009 -
Gabi3151g00023 172 ProSiteProfiles Protein kinase domain profile. 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3151g00023 Gabi-Chr3151 231172 231690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3151g00023 56 143 MAP Kinase Kinase Kinase AT5G67080 39.773 4.36e-15 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gabi3151g00023 Pkinase 5.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3151g00023 - K20716 gmx:102664043 113.62