Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3151g00018 ATGGCTCCAAGGGATAAGAGTAACAAGAGTGGCGTGAAGAAATCCAAGTCCAGCGAAGAGGTGGTGCGTTTTCGAGGAGTGAGGAGAAGGCCATGGGGAAAATACGCCGCCGAGATCAGAGACCCCCGAAAGAAGAGGCGCGTCTGGCTCGGAACCTTTGACACCGCCGCAGAAGCAGCCAGAGCCTACGACTCCGCCGCCATCGAGCTCCGCGGCTCAAAGGCCATAACTAACTTCCCGAACACTTTCAATAACAACAATCACAAAGTCATGCACATTGGTGATGTCATAGCCAGTGATTTTGATTCATCCTCCGTTATCGCTACGAAGGGTGAAAAAGAGTTTGACCTTAACCACCCTCCTCCTCAAGAAATTGAGGAATCCTAA 387 0.5116 MAPRDKSNKSGVKKSKSSEEVVRFRGVRRRPWGKYAAEIRDPRKKRRVWLGTFDTAAEAARAYDSAAIELRGSKAITNFPNTFNNNNHKVMHIGDVIASDFDSSSVIATKGEKEFDLNHPPPQEIEES 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3151g00018 128 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Gabi3151g00018 128 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Gabi3151g00018 128 CDD AP2 31 75 IPR001471 GO:0003700|GO:0006355
Gabi3151g00018 128 MobiDBLite consensus disorder prediction 1 20 - -
Gabi3151g00018 128 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Gabi3151g00018 128 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Gabi3151g00018 128 Pfam AP2 domain 23 72 IPR001471 GO:0003700|GO:0006355
Gabi3151g00018 128 FunFam Ethylene-responsive transcription factor 2 23 81 - -
Gabi3151g00018 128 SUPERFAMILY DNA-binding domain 24 81 IPR016177 GO:0003677
Gabi3151g00018 128 Gene3D AP2/ERF domain 22 82 IPR036955 GO:0003700|GO:0006355
Gabi3151g00018 128 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 8 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3151g00018 Gabi-Chr3151 157600 157986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3151g00018 11 80 AP2-EREBP Transcription Factor Family AT1G03800 74.286 1.36e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi3151g00018 AP2 2.9e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3151g00018 K09286 - csin:114307084 103.605