Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3151g00007 ATGGTTGCTCCAGAGGAATGCATATGGAATGTGGTGGTTGTAAAGAGTTCAATGCCTCACTCAATAAGTTCATTGATGAGAGAAGAAAATATAATGAGATCGTTGATTGGTTGTGAAGAATTCCTTCAATGCCGTTTTGGCAAATTCACTATTGAGAATGGTGAATTCATCTATAATCTTGTTATGGAATTTGCACCTTATGGTTCTCTACTCGATAACATTCTTCTATTTCCTTCATCTAAGAATGATGCAAAGTATCAACTCAAGATTGCAGATTTTGGATTGTCTAAGACTAAAGAAGAGATTATCAATGCTGAGTATAGAAATTTCAGGTTTAGAGGGACACCGTTATACATGTCACCAGAATCAGTTAAGGGTCAGATTGAAACATCATTGGATATATGGTCTCTTGGAAGTATAGTCATAGAGATGATCACTGGGTTAAATGTATGGAGGAACCCTCCAACTTCAAAGGAGATGATTCCAACTAAAAATGAGATGATGTACAAGCTTGTTCAACTCTCGGTTCGACCAAGCATTGTCCTTAAAGAAGCACCGAAGATACCTAGTGGAGTAAGTGAGGATTGCAGAGATTTCTTGAGCAAATGTTTCATCAAGAATCCTAGTCAGAGATGGATTGCTAGCAAGCTTCTCCACCATCCTTTTCTGTTTTCTCCATGTGATTCTTTTGGAGGTTATGAAAGATTTCATATGGTTAATTCGTCGTCCTCATTTTTCACTTATGATTGTAAGAGGATACCTTTATGA 768 0.3711 MVAPEECIWNVVVVKSSMPHSISSLMREENIMRSLIGCEEFLQCRFGKFTIENGEFIYNLVMEFAPYGSLLDNILLFPSSKNDAKYQLKIADFGLSKTKEEIINAEYRNFRFRGTPLYMSPESVKGQIETSLDIWSLGSIVIEMITGLNVWRNPPTSKEMIPTKNEMMYKLVQLSVRPSIVLKEAPKIPSGVSEDCRDFLSKCFIKNPSQRWIASKLLHHPFLFSPCDSFGGYERFHMVNSSSSFFTYDCKRIPL 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3151g00007 255 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 11 72 - -
Gabi3151g00007 255 ProSiteProfiles Protein kinase domain profile. 1 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3151g00007 255 SUPERFAMILY Protein kinase-like (PK-like) 11 229 IPR011009 -
Gabi3151g00007 255 Pfam Protein kinase domain 72 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3151g00007 255 Gene3D Transferase(Phosphotransferase) domain 1 71 229 - -
Gabi3151g00007 255 SMART serkin_6 6 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3151g00007 Gabi-Chr3151 90173 92725 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3151g00007 11 223 MAP Kinase Kinase Kinase AT3G50310 32.812 8.78e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gabi3151g00007 Pkinase 2.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3151g00007 - - gmx:102664043 248.054