Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3145g00022 ATGCCTTTTGGTTTGGTCTCAGCCTGGAACAAGCGTAGGAGAAGCAAGTCTCAAGATCATTCAGACCCTTGGATTTATAAACCTGCTGAGTTTTGGCAACTTCAAGATGAAGCACCACAACCTGCAAAAAGGAGGCATGGATCATCTGTTTTCACACTCAAGGAGATGGAAGAGGCAACATGTTCATTCTGTGATGATAATCTGCTTGGAAAAGGAGGTTTTGGCAGGGTCTATAGGGGCACTTTGCGGTCAGGAGAGGTTGTAGCAATCAAGAAAATGGAGCTGCCAGCAATTAAAGAATCTGAGGGGGAACGTGAATTCCGTGTAGAAGTTGACATATTGAGCAGACTCGACCACCCAAATCTTGTTTCCTTGATAGGATACTGTGCTGATGGGAAGCATAGATTCCTAGTATACGAATACATGCATAATGGGAACCTGCAAGATCATTTGAATGGAATCGGGGAAAGAAAAATGGATTGGCCTCTAAGACTCAAAGTGGCATTGGGAGCTGCAAAAGGGCTTGCTTATCTCCATTCAAGTTCTTGTGTTGGAATTCCTATTGTTCATAGAGATTTCAAATCCACCAATGTTCTTTTAAATGCCAATTTTGAAGCAAAGATATCTGATTTTGGGTTTGCCAAGCTAATGCCAGAAGCACAGGAGACACATGTGACTGCTAGAGTACTTGGTACCTTTGGCTATTTTGACCCTGAGTATATATCGAGTCTGCACATTCGTGGTAGAATAACTAAGAACTTCAGTATCTTGTTTAGATGGCTTGAAAACAAAGTTACTTTCTTCTCTCTTTTATCTCAGGTCACATGTTCCATTCCACAGCCATCATGCAACCAAACAGCCATTGAAATTTTGTAG 876 0.4178 MPFGLVSAWNKRRRSKSQDHSDPWIYKPAEFWQLQDEAPQPAKRRHGSSVFTLKEMEEATCSFCDDNLLGKGGFGRVYRGTLRSGEVVAIKKMELPAIKESEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGIGERKMDWPLRLKVALGAAKGLAYLHSSSCVGIPIVHRDFKSTNVLLNANFEAKISDFGFAKLMPEAQETHVTARVLGTFGYFDPEYISSLHIRGRITKNFSILFRWLENKVTFFSLLSQVTCSIPQPSCNQTAIEIL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3145g00022 291 FunFam serine/threonine-protein kinase PBS1-like 32 141 - -
Gabi3145g00022 291 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Gabi3145g00022 291 FunFam Os07g0541700 protein 142 232 - -
Gabi3145g00022 291 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Gabi3145g00022 291 Pfam Protein kinase domain 66 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3145g00022 291 SUPERFAMILY Protein kinase-like (PK-like) 41 244 IPR011009 -
Gabi3145g00022 291 Gene3D Phosphorylase Kinase; domain 1 32 141 - -
Gabi3145g00022 291 Gene3D Transferase(Phosphotransferase) domain 1 142 253 - -
Gabi3145g00022 291 ProSiteProfiles Protein kinase domain profile. 63 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3145g00022 291 PANTHER OS01G0750732 PROTEIN 30 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3145g00022 Gabi-Chr3145 335496 337297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3145g00022 46 246 Receptor kinase-like Gene Family AT3G58690 48.544 5.40e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Gabi3145g00022 Pkinase 4.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3145g00022 - - gmx:100820613 457.603