Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3145g00008 ATGTCATCGAGATCATATGCTAATCTCTTAGACTTAGCTGGTGGAGACTTGCTTGCTATTCCTCACACGCCAAGAACTATTCCAAGGATTATGACTGTTCCTGGAATTATTTCTGACCTGGATGGTTATAGTTGTAATGATGGGGATTCAGATGTTAGCTCTTCTGGATGTCGAGAGAGGAAAATCATTGTGGCAAACATGCTGCCATTGCAGGCTAAAAGAGATACAGAATCTGCTAAATGGTGCTTCTGTTGGGATGAGGATTCAATTTTATTACATTTAAAAGATGGTTTTTCTTCTGATACTGAGGTCATTTATGTGGGTTCCCTTAAGGTCGAAATAGATGCCAGTGAGCAGGAAGAAGTCGCTCAGAGATTACTTGATGACTTTAATTGTGTACCCACCTTTCTACCCCATGATCTCCAGAAGAAGTTCTATCTTGGCTTTTGTAAGCAGCAGCTTTGGCCTCTCTTTCACTATATGCTACCCATATGCTCAGATCATGGTGATCGCTTTGACCGCGTGCTTTGGCAGGCTTATGTTTGTGCTAACAAAGTATTTGCAGACAAGGTTATGGAAGTAATTAATCCTGATGATGATTTTGTTTGGGTTCATGACTATCACTTGATGGTTTTGCCTACTTTCTTGAGGAAAGGATATAATCGAGTTAAAGTTGGGTTCTTTCTCCACAGTCCTTTTCCTTCATCTGAAATTTATCGAACTTTGCCAGTCAGAGATGAAATTTTGAGAGGATTGTTAAATTCTGATTTAATTGGACTTGATTACTTTGGCCGCACTATATTTATTAAAATTTTACCTGTAGGCATTCACATGGGTAGGCTTGAATCTGTATTAAACCTTTCTTCTACATCTGCTAAACTAAAAGAGGTTCAGGAAGAGTTTAAGGGTAGGAAGGTAATTCTCGGTGTTGATGACATGGATATTTTTAAGGGCATCAATCTGAAACTTCTAGCTGTGGAGCAGTTGCTACTGCAGAATCCAGATTTGCAGGGCAAAGTTGTCCTAGTTCAAATTGTAAATCCTGCGAGGGGTTCGGGAAAGGATGTTCAGGAAGCAAAGAAGGAAACATATTTAATTGCCCAGAGGATCAATGACACTTATGCTTCAAGTCATTATCAGCCCGTCATTCTCATTGATCGCCCTGTTCCTCGTTTTGAGAAGAGTGCCTATTATGCTGTAGCCGAATGTTGCATTGTCAATGCTGTAAGGGATGGCATGAACTTAGTCCCTTACAAATATATTGTCTGCAGACAGGGAACTGAACGACTGGATGAATCAATGGGTAGAAAAAGTGATTCTCCTCGCACAAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGTTCGCCTTCTCTAAGTGGGGCGATCAGGGTCAATCCCTGGGACATAGATGCTGTTGCTGAAGCTCTGAATGCGGCAATTACTATGAGTGATTCAGAGAAGCAGTTGCGCCATGAGAAACACTATCGGTATGTCAGTTCTCATGATGTTGCATATTGGGCACGCAGCTTTATGCAGGATTTGGAGAGAGCCTGCAAAGATCATTATTCCAAAAGGTGCTGGGGTATTGGTTTTGGTCTGGGGTTTAGAGTTGTATCGCTTTTTCATGGTTTTAGGAAGTTGTACATTGACCATGTTGTTTCAGCGTACAAGAGAACGAGTAGAAGGGCCATCTTTCTTGATTATGATGGTACTATTGTACCTCAATCTTCTTTAAATAAAATCCCCAGCCCTGAAGTCATATCTGTGCTAAATGCTCTGTGTAATGATACCAAGAATATTGTGTTCATTGTCAGCGGGAGGGGAAGAGATTCTCTGAGTGATTGGTTTACTTCATGCCAAATGCTGGGACTTGCAGCTGAACATGGGTACTTTTTAAGGTGGAATAGAGATTCCGAATGGGAAACCAGTCACTTGTCTGCGGACCTTGATTGGAAAAGGATAGTGGAACCTGTCATGCAGTCGTATACAGAAGCAACTGATGGATCTAATATTGAAATTAAAGAAAGTGCTTTGGTATGGCATCATCAAGATGCAGACCCTGATTTTGGTTCTTGCCAAGCCAAAGAATTGTTGGATCACTTGGAAAGTGTGCTTGCTAATGAACCAGCAGTTGTTAAAAGAGGCCAGCATATTGTTGAAGTTAAGCCCCAGGGAGTAAGCAAGGGGTTGGTAGCTGAAAAGGTTCTTTCGACTATGGTTAATGGCGGTAATCCCCCAGATTTTGTAATGTGCATTGGAGATGATAGGTCTGATGAAGACATGTTTGAGAGCATTTTGAGGACAGTCTCGTGCCCATCTTTACCATCTGCTCCTGATATCTTTGCATGCACTGTAGGAAGGAAACCTAGCAAGGCCAAGTATTTTCTTGATGACACTGCTGATGTGGTAAAGTTGCTTCAGGGCCTTGCTACTTCATCTAACCCGAAACCCAGGCTTCTTGCCCAATTCCAGGTTTCTTTTGAGAGCACAATTTGA 2496 0.4175 MSSRSYANLLDLAGGDLLAIPHTPRTIPRIMTVPGIISDLDGYSCNDGDSDVSSSGCRERKIIVANMLPLQAKRDTESAKWCFCWDEDSILLHLKDGFSSDTEVIYVGSLKVEIDASEQEEVAQRLLDDFNCVPTFLPHDLQKKFYLGFCKQQLWPLFHYMLPICSDHGDRFDRVLWQAYVCANKVFADKVMEVINPDDDFVWVHDYHLMVLPTFLRKGYNRVKVGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGLDYFGRTIFIKILPVGIHMGRLESVLNLSSTSAKLKEVQEEFKGRKVILGVDDMDIFKGINLKLLAVEQLLLQNPDLQGKVVLVQIVNPARGSGKDVQEAKKETYLIAQRINDTYASSHYQPVILIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTERLDESMGRKSDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVAEALNAAITMSDSEKQLRHEKHYRYVSSHDVAYWARSFMQDLERACKDHYSKRCWGIGFGLGFRVVSLFHGFRKLYIDHVVSAYKRTSRRAIFLDYDGTIVPQSSLNKIPSPEVISVLNALCNDTKNIVFIVSGRGRDSLSDWFTSCQMLGLAAEHGYFLRWNRDSEWETSHLSADLDWKRIVEPVMQSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLSTMVNGGNPPDFVMCIGDDRSDEDMFESILRTVSCPSLPSAPDIFACTVGRKPSKAKYFLDDTADVVKLLQGLATSSNPKPRLLAQFQVSFESTI 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3145g00008 831 FunFam Alpha,alpha-trehalose-phosphate synthase 284 499 - -
Gabi3145g00008 831 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 519 - -
Gabi3145g00008 831 NCBIfam HAD-IIB family hydrolase 563 764 IPR006379 -
Gabi3145g00008 831 NCBIfam trehalose-phosphatase 560 810 IPR003337 GO:0003824|GO:0005992
Gabi3145g00008 831 SUPERFAMILY HAD-like 562 810 IPR036412 -
Gabi3145g00008 831 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 691 822 - -
Gabi3145g00008 831 CDD HAD_TPP 563 804 - -
Gabi3145g00008 831 Pfam Trehalose-phosphatase 565 799 IPR003337 GO:0003824|GO:0005992
Gabi3145g00008 831 FunFam Trehalose-6-phosphate synthase 8 55 261 - -
Gabi3145g00008 831 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 561 678 - -
Gabi3145g00008 831 Pfam Glycosyltransferase family 20 260 515 IPR001830 GO:0003824|GO:0005992
Gabi3145g00008 831 CDD GT20_TPS 60 515 IPR001830 GO:0003824|GO:0005992
Gabi3145g00008 831 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 258 810 IPR001830 GO:0003824|GO:0005992
Gabi3145g00008 831 Gene3D Glycogen Phosphorylase B; 50 266 - -
Gabi3145g00008 831 FunFam Trehalose-6-phosphate synthase 2 645 724 - -
Gabi3145g00008 831 Gene3D - 561 679 IPR023214 -
Gabi3145g00008 831 Gene3D - 691 819 IPR023214 -
Gabi3145g00008 831 Gene3D Glycogen Phosphorylase B; 279 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3145g00008 Gabi-Chr3145 93853 98951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3145g00008 1 831 Trehalose Biosynthesis Gene Families AT1G23870 70.819 0.0 1284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3145g00008 K16055 - gmx:100775779 1509.97