Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3142g00041 ATGCCTGAATGTCTCATCTCCAATCCCAAACCCTCGAATCTCAGAACGCTATTCTCTCAGTTTCTCTGTTCTTCAACTGATCGTGAGAAGAGAGAGCTTCCAACACTGCCGGAAGCTGAGATGGAAACTCGCGCAGCAGCAAAGAGGAGGGTCAACCAACCCGAGAATCAACCGCTCAAAAAGAAACGTGTTGTGTTGGGTGAAATTTCCAACTTACCTGATCTCACCGCTACTCAAACTTCGCTTCCCAAGAAACCGAAATGTCTGAAGAATCCCAAGGTCAAGAAAGCAGCGTCGTCCACGAAGAAGAACCTCAGTTCTGCGGATTCTTCAAGGGTCGAGGTGGAGAAATCAGTTGACATTGTTATTGATGCAAAATTAAGCAGCCATGGCAATTCCGAAGGTTCTTTGGTTTCCGACATGTATAACTATCTTAGCTCAATGGAGGCGGAGAAAAAACGAAGACCAATGATTGACTACATGGTTAAAGTTCAGAAAGAAATTACTGCAAACAATAGAGGAACATTGGTGGATTGGTTAGTAGAGGTTGCAGAGGAGTACAACCTTCTCTCCGACACTCTTCATCTCTCTGTTTCATACATTGACAGATTTTTATCAATTAATCCTGTGACTAAGCCCAAGCTTCAGTTGCTGGGTGTTTCCTCTGTGCTCATTGCATCGAAGTATGAAGAAATTGACCCACCTAAGGTAGAAAAGTTCTGCTACATCACTGCTGATACGTACAACAAGGCAGAGGTTGTAAAGATGGAATCGGACATACTCAAGTCACTAAATTATGAAATGGGCAACCCTACTGTTAAGACTTTTCTAAGGAGGTTTACTGGGATTGCTTCTGAGGATAAAAAAGCTCCAAATTTGATGTTTGTGTTTATGACTTCCTATCTTGCTGAGCTAAGCTTGTTGGACTATTATTGTTTAAAATTCTTGCCTTCCTTGGTAGCTGCGTCTGTAATATTTCTTGCTAGATTTATCATCTGGCCTAAAGTGCATCCCTGGAATTCAGCCCTGCATGAATGCTCTGGGTATAAATCAGTGGAGTTAAAAGAATGCGTTCTCCTTTTACATGACTTGCATAGGGGAAGAAGGGGAGGGTCATTCCAAGCTACTCGGGAGAAATACAAGCAGCACAATTTTAAATACGTGGCAAACCTCCACTGTCCTCCACATTTGCCAAATTCTCTCTTTGAAGAAGAGTGA 1218 0.4261 MPECLISNPKPSNLRTLFSQFLCSSTDREKRELPTLPEAEMETRAAAKRRVNQPENQPLKKKRVVLGEISNLPDLTATQTSLPKKPKCLKNPKVKKAASSTKKNLSSADSSRVEVEKSVDIVIDAKLSSHGNSEGSLVSDMYNYLSSMEAEKKRRPMIDYMVKVQKEITANNRGTLVDWLVEVAEEYNLLSDTLHLSVSYIDRFLSINPVTKPKLQLLGVSSVLIASKYEEIDPPKVEKFCYITADTYNKAEVVKMESDILKSLNYEMGNPTVKTFLRRFTGIASEDKKAPNLMFVFMTSYLAELSLLDYYCLKFLPSLVAASVIFLARFIIWPKVHPWNSALHECSGYKSVELKECVLLLHDLHRGRRGGSFQATREKYKQHNFKYVANLHCPPHLPNSLFEEE 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3142g00041 405 FunFam Cyclin superfamily protein, putative 268 340 - -
Gabi3142g00041 405 ProSitePatterns Cyclins signature. 173 204 IPR006671 -
Gabi3142g00041 405 PIRSF Cyclin_A_B_D_E 7 403 IPR046965 GO:0016538|GO:0044772
Gabi3142g00041 405 PANTHER CYCLINS 109 382 IPR039361 -
Gabi3142g00041 405 SUPERFAMILY Cyclin-like 271 396 IPR036915 -
Gabi3142g00041 405 SMART cyclin_7 275 363 IPR013763 -
Gabi3142g00041 405 SMART cyclin_7 178 262 IPR013763 -
Gabi3142g00041 405 Pfam Cyclin, N-terminal domain 140 268 IPR006671 -
Gabi3142g00041 405 MobiDBLite consensus disorder prediction 77 110 - -
Gabi3142g00041 405 Gene3D - 140 390 - -
Gabi3142g00041 405 FunFam G2/mitotic-specific cyclin 156 267 - -
Gabi3142g00041 405 SUPERFAMILY Cyclin-like 144 268 IPR036915 -
Gabi3142g00041 405 CDD CYCLIN_AtCycA-like_rpt2 271 385 - -
Gabi3142g00041 405 SMART Cyclin_C_2 271 394 IPR004367 -
Gabi3142g00041 405 Pfam Cyclin, C-terminal domain 271 393 IPR004367 -
Gabi3142g00041 405 Gene3D - 154 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3142g00041 Gabi-Chr3142 445256 447160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3142g00041 43 404 Core Cell Cycle Gene Families AT5G43080 50.685 7.09e-121 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3142g00041 K06627 - gmx:100776007 427.172